Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq101527 214 4e-53 seq160575 77.0 8e-12 seq277942 73.4 1e-10 >seq101527 Length=647993 Score = 214 bits (236), Expect = 4e-53 Identities = 290/392 (74%), Gaps = 12/392 (3%) Strand=Plus/Plus Query 30 TTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCCC 89 ||||||||| ||||||||||||||||||| ||| || | | | ||||||||| | Sbjct 160990 TTTTCAACGAACGTCGGTTCGGTCCTCCAGT--GTATTTTACTACACCTTCAACCTGGTC 161047 Query 90 ATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGCGACTAGACGCCCTAGTAAGAC 149 || | |||||| | ||||| ||||||||| | | ||||| |||||| |||| | Sbjct 161048 AT-GACTAGATCACTGGGTTT-CGGGTCTATGGCT-ACATACTAG-CGCCCTCTTAAGGC 161103 Query 150 TCGCTTTTCGCTACGCCTCCC-CTATTCGGTTAAGCTTTGCCACTGAAAATAAGTCGCTG 208 ||||||| | ||||| |||| || | || | | | |||| || |||| |||| | Sbjct 161104 TCGCTTT-CACTACGGCTCCGTCTTTACGACTTAACCTTGCATGCAAACATAACTCGCCG 161162 Query 209 ACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCTTGTACGCA 268 | |||| | ||| ||| |||| ||| || || | ||| ||| |||||| | Sbjct 161163 GCTCATTCTTCAATAGGCACGCCATCAGGCATTAACGCC--CTCTGACTTCTTGTAAGTT 161220 Query 269 TACGGTTTCAGGAT-CTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACG 327 || |||||||||| || ||||||||||||||| ||||| |||||| ||||||||||||| Sbjct 161221 TATAGTTTCAGGATACTTTTTCACTCCCCTCTC-GGGGTACTTTTCACCTTTCCCTCACG 161279 Query 328 GTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATAT 387 ||||| ||||||||||||| | | |||||||||||||| |||||||| | || || Sbjct 161280 GTACTGGTTCACTATCGGTGACTAGATAGTATTTAGCCTTACGAGATGGTCCTCGCAGAT 161339 Query 388 TCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419 || ||||| ||||||||| |||| ||||| Sbjct 161340 TCCGACAAGATTTCTCGTGTCTCGTCGTACTC 161371 >seq160575 Length=2773 Score = 77.0 bits (84), Expect = 8e-12 Identities = 81/103 (79%), Gaps = 3/103 (3%) Strand=Plus/Plus Query 269 TACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGG 328 |||||||| | | |||||| |||| | ||| | | || |||||| ||||||||||||| Sbjct 2189 TACGGTTTTACGTACTATTTAACTCTC-TCTTCAGAGTGCTTTTCAACTTTCCCTCACGG 2247 Query 329 TACTAGTTCACTATCGGTC-AGTCAGTAGTATTTAGCCTTGGA 370 |||| |||| ||||||||| || | | |||||||| ||||| Sbjct 2248 TACTTGTTCGCTATCGGTCTCGTTA-TGATATTTAGCTTTGGA 2289 >seq277942 Length=7678 Score = 73.4 bits (80), Expect = 1e-10 Identities = 79/101 (78%), Gaps = 3/101 (3%) Strand=Plus/Minus Query 271 CGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTA 330 |||||||| | || ||| | | | |||| | ||||||||| ||||||||||||||| Sbjct 1392 CGGTTTCACGTACT-TTTGAATACTCTCTTCAAAGTTCTTTTCTACTTTCCCTCACGGTA 1334 Query 331 CTAGTTCACTATCGGTC-AGTCAGTAGTATTTAGCCTTGGA 370 || |||| ||||||| | |||| | |||||||||||| || Sbjct 1333 CTTGTTCGCTATCGGACTCGTCAAT-GTATTTAGCCTTAGA 1294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1237485325184