Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq303424 237 4e-60 seq101527 214 4e-53 seq2305 131 4e-28 seq48397 113 1e-22 seq64344 95.1 3e-17 >seq303424 Length=815 Score = 237 bits (262), Expect = 4e-60 Identities = 300/403 (74%), Gaps = 22/403 (5%) Strand=Plus/Plus Query 21 CTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCAC 80 |||||||| |||||||| | |||||||||| || | |||||||||||||||||||| Sbjct 369 CTTCTTCACTCACGCGGCGTCGCTGCATCAGAGTTTCCTCCATTGTGCAATATTCCCCA- 427 Query 81 TGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTC 140 ||||||||||||||||||| ||| |||||||||||| ||| |||||| | ||| |||||| Sbjct 428 TGCTGCCTCCCGTAGGAGTTTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCACCCTCTC 487 Query 141 AGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTAGCTAATCCCATC 200 || || |||| ||||||||||| |||||||| ||||||||||||| |||||||| | Sbjct 488 AGGCCGGCTACTGATCGTCGCCTTGGTGGGCCGTTACCCCGCCAAC-AGCTAATCAGACG 546 Query 201 TGGGTTCATCCGATAGTGAGAGGCCCGAAGGT-------CCCCCTCTTTGGTCTTGCGAC 253 || |||| || || | | ||| || | || || | | | || | Sbjct 547 CGG----ATCC-ATCGT-ATACCACCGGAGTTTTTCACACCGCCCCATGCGAGCTGTGCG 600 Query 254 GTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCA-GTTTCCCA 312 ||||||||||||||| | |||| | ||||||||||| || |||| ||| ||| Sbjct 601 CTTATGCGGTATTAGCACCTATTTCTAAGTGTTATCCCCCTGTATACGGCAGGTTATCCA 660 Query 313 GACATTACTCACCCGTCCGCCACTCGTCAGCGA-AGCAGCAAGCTGCTTCCTGTTACCGT 371 | |||||||||||||||||||| | | | | || | | | | || | |||| Sbjct 661 CGCGTTACTCACCCGTCCGCCACT----AACTATATCACTAGGTTTCAATATGAT-CCGT 715 Query 372 TCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 ||||||||||||||||| || |||||||||||||| ||||| Sbjct 716 TCGACTTGCATGTGTTAAGCACGCCGCCAGCGTTCATCCTGAG 758 >seq101527 Length=647993 Score = 214 bits (236), Expect = 4e-53 Identities = 165/195 (85%), Gaps = 1/195 (1%) Strand=Plus/Plus Query 1 GTACTTTACAACCCGAAGG-CCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGC 59 |||||||||||||| ||| ||||| |||||||||||| || ||| |||||| ||| || Sbjct 163153 GTACTTTACAACCCATAGGGCCTTCATCATACACGCGGAATTGCTCCATCAGACTTTCGT 163212 Query 60 CCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCC 119 |||||||| || |||||| ||||||||||||||||||||| |||||||| |||||||||| Sbjct 163213 CCATTGTGGAAAATTCCCTACTGCTGCCTCCCGTAGGAGTTTGGACCGTTTCTCAGTTCC 163272 Query 120 AGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCC 179 | |||||| || |||||||| ||| | |||| | ||| | |||| |||| ||| ||||| Sbjct 163273 AATGTGGCCGGACATCCTCTTAGATCGGCTACGTATCATTGCCTTGGTGAGCCGTTACCT 163332 Query 180 CGCCAACTAGCTAAT 194 | ||||||||||||| Sbjct 163333 CACCAACTAGCTAAT 163347 >seq2305 Length=614 Score = 131 bits (144), Expect = 4e-28 Identities = 102/122 (84%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 |||||||||| ||| | || || | ||||| | |||||| ||||||| |||||||| Sbjct 493 TTTACAACCCATAGGGCCTCATCCTTCACGCTACTTGGCTGGTTCAGGCTCTCGCCCATT 552 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 | ||||||||| |||||||||||||||||||||| |||||||| ||||||||||| ||| Sbjct 553 GACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTATCTCAGTTCCAATGT 612 Query 125 GG 126 || Sbjct 613 GG 614 >seq48397 Length=443 Score = 113 bits (124), Expect = 1e-22 Identities = 82/95 (86%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 |||||| ||||| ||||||| |||||||| | ||||||||||| || | |||||| Sbjct 96 TTTACATACCGAAATACTTCTTCGCTCACGCGGCGTCGCTGCATCAGGGTTTCCCCCATT 37 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGT 99 ||||||||||||||||||||||||||||||||||| Sbjct 36 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGT 2 >seq64344 Length=403 Score = 95.1 bits (104), Expect = 3e-17 Identities = 78/95 (82%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 ||||| | ||||| |||||||| | |||||||| | |||| |||| || | ||||| Sbjct 308 TTTACGATCCGAAAACCTTCTTCCTCCACGCGGCGTTGCTGGGTCAGAGTTTCCTCCATT 367 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGT 99 | |||||||||||||||||||||||||||||||| Sbjct 368 GCCCAATATTCCCCACTGCTGCCTCCCGTAGGAGT 402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1218348954176