Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq303424 441 2e-121 seq101527 266 1e-68 seq48397 260 4e-67 seq64344 233 6e-59 seq2305 174 5e-41 >seq303424 Length=815 Score = 441 bits (488), Expect = 2e-121 Identities = 384/468 (82%), Gaps = 7/468 (1%) Strand=Plus/Minus Query 23 AGCGGCGGACGGGTGAGTAACGCGTGGGTAACCTGCCCTGTACACACGGATAACATACCG 82 || |||||||||||||||||||||||| ||||||||| | |||| |||||||| | Sbjct 684 AGTGGCGGACGGGTGAGTAACGCGTGGATAACCTGCCGTATACAGGGGGATAACACTTAG 625 Query 83 AAAGGTATGCTAATACGAGATAATATACTTTTATCGCATGGTAGAAGTAT-CAAAGCTCC 141 ||| ||||||||| |||| | |||||||| | || | ||| |||| Sbjct 624 AAATAGGTGCTAATACCGCATAA-GCGCACAGCTCGCATGG-GGCGGTGTGAAAAACTCC 567 Query 142 GGCGGTACAGGATAGACCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGG 201 || |||| | ||| || |||||||||||||||| ||||| ||||||||| ||||||| Sbjct 566 GGTGGTATACGATGGATCCGCGTCTGATTAGCT-GTTGGCGGGGTAACGGCCCACCAAGG 508 Query 202 CGACGATCAGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCA 261 |||||||||||||||| ||||||||||||| |||||||||||| |||||||||||| ||| Sbjct 507 CGACGATCAGTAGCCGGCCTGAGAGGGTGAACGGCCACATTGGGACTGAGACACGGCCCA 448 Query 262 AACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCA 321 |||||||||||||||||||| |||||||||||||||||||| ||| |||||||||| Sbjct 447 AACTCCTACGGGAGGCAGCA-TGGGGAATATTGCACAATGGAGGAAACTCTGATGCAGCG 389 Query 322 ACGCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGATAATG 381 |||||||||||| || |||| |||| | |||||||||| || || |||||||| || Sbjct 388 ACGCCGCGTGAGTGAAGAAGTAATTCGTAT-GTAAAGCTCTATCAGCAGGGAAGATAGTG 330 Query 382 ACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGG 441 ||||||| ||| | ||||| |||||||| |||||||||||||||||||||||||||| | Sbjct 329 ACGGTACCTGACTAAGAAGCTCCGGCTAAATACGTGCCAGCAGCCGCGGTAATACGTATG 270 Query 442 GGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGG 489 | || ||||||||||||| ||||| ||| |||||||| | |||||||| Sbjct 269 GAGCAAGCGTTATCCGGATTTACT-GGGTGTAAAGGGAGTGTAGGTGG 223 >seq101527 Length=647993 Score = 266 bits (294), Expect = 1e-68 Identities = 271/354 (77%), Gaps = 27/354 (8%) Strand=Plus/Minus Query 168 ATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAGG 227 |||||||||||||| ||||||||||| |||||||| | ||| |||||||| || ||||| Sbjct 163347 ATTAGCTAGTTGGTGAGGTAACGGCTCACCAAGGCAATGATACGTAGCCGATCTAAGAGG 163288 Query 228 GTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGG 287 || |||||||||||||||||||| |||||||||||||||||||||||||||||| ||| Sbjct 163287 ATGTCCGGCCACATTGGAACTGAGAAACGGTCCAAACTCCTACGGGAGGCAGCAGTAGGG 163228 Query 288 AATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGG-CCTT 346 ||| || |||||||| | |||| |||||| ||||| ||||||| |||||||| ||| Sbjct 163227 AATTTTCCACAATGGACGAAAGTCTGATGGAGCAATTCCGCGTGTATGATGAAGGCCCTA 163168 Query 347 CGGGTCGTAAAGCTCTGTCCTCAAGGA--------------AGATAATGA-CGGTACTTG 391 |||| |||||| |||| | ||| || ||||| ||| |||| Sbjct 163167 TGGGTTGTAAAGTACTGTTATAGGGGATAAAAAAGTTCGATAGGAAATGATCGGACCTTG 163108 Query 392 ----------AGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGG 441 | || ||| || |||||||||||||||||| |||||||||||||||| Sbjct 163107 ATAGTACCCTATCAGAAAGTGACGACTAACTACGTGCCAGCAGTCGCGGTAATACGTAGG 163048 Query 442 GGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTT 495 | |||||||| |||||||| | |||||||||| ||| | |||||||| ||| Sbjct 163047 TCACAAGCGTTATTCGGAATTA-TTGGGCGTAAAGAGTGAGCAGGTGGTTGCTT 162995 >seq48397 Length=443 Score = 260 bits (288), Expect = 4e-67 Identities = 193/224 (86%), Gaps = 1/224 (0%) Strand=Plus/Plus Query 262 AACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCA 321 |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| Sbjct 1 AACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGATGCAGCG 60 Query 322 ACGCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGATAATG 381 ||||||||||||||| |||| ||||| ||||| |||| || || |||||| |||| Sbjct 61 ACGCCGCGTGAGCGAAGAAGTATTTCGGTATGTAAAACTCTATCAGCAGGGAAGAAAATG 120 Query 382 ACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGG 441 ||||||| ||| | ||||| |||||||| |||||||||||||||||||||||||||| | Sbjct 121 ACGGTACCTGACTAAGAAGCACCGGCTAAATACGTGCCAGCAGCCGCGGTAATACGTATG 180 Query 442 GGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAG 485 | || ||||||||||||| ||||| ||| |||||||| ||| || Sbjct 181 GTGCAAGCGTTATCCGGATTTACT-GGGTGTAAAGGGAGCGCAG 223 >seq64344 Length=403 Score = 233 bits (258), Expect = 6e-59 Identities = 200/242 (83%), Gaps = 4/242 (2%) Strand=Plus/Minus Query 262 AACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCA 321 ||||||||||||||||||||||||||||||||| |||||| ||| |||| ||||| Sbjct 403 AACTCCTACGGGAGGCAGCAGTGGGGAATATTGGGCAATGGAGGAAACTCTGACCCAGCA 344 Query 322 ACGCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAG-GAAGA-TA- 378 |||||||||| || ||||| ||||| ||||||| ||||||| | || || || Sbjct 343 ACGCCGCGTGGAGGAAGAAGGTTTTCGGATCGTAAACTCCTGTCCTTTGGAGACGAGTAG 284 Query 379 ATGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGT 438 | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 283 AAGACGGTATCCAAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGT 224 Query 439 AGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAG 498 ||||||| |||||| ||||||| || | |||||||||||| ||||||| || | |||| Sbjct 223 AGGGGGCAAGCGTTGTCCGGAA-TAATTGGGCGTAAAGGGCGCGTAGGCGGCTCGGTAAG 165 Query 499 TC 500 || Sbjct 164 TC 163 >seq2305 Length=614 Score = 174 bits (192), Expect = 5e-41 Identities = 210/286 (73%), Gaps = 25/286 (9%) Strand=Plus/Minus Query 236 CCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGC 295 ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| Sbjct 614 CCACATTGGAACTGAGATACGGTCCAAACTCCTACGGGAGGCAGCAGTGAGGAATATTGG 555 Query 296 ACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCTTCGGGTCGTA 355 |||||||| | ||||||| |||| | | |||||| ||||| | ||| |||| ||| Sbjct 554 TCAATGGGCGAGAGCCTGAACCAGCCAAGTAGCGTGAAGGATGAGGCCCTATGGGTTGTA 495 Query 356 AAGCTCTGTCCTCAAGGAAGATAATG------ACG---------------GTACTTGAGG 394 || ||| | | | || ||||| | ||| |||| | | Sbjct 494 AACTTCTTTTAT-ATGG--GATAAAGTTTTCCACGTGTGGAATTTTGTATGTACCATATG 438 Query 395 AGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTAT 454 | ||| ||||||||| |||||||||||||||||||||||| ||| || |||||||| Sbjct 437 AATAAGGATCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGATGCGAGCGTTAT 378 Query 455 CCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500 ||||| ||| | ||| ||||||| ||| || || | ||||||| Sbjct 377 CCGGATTTA-TTGGGTTTAAAGGGAGCGCAGACGGGATGTTAAGTC 333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1492636938624