Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq231405 196 9e-48 seq212967 138 2e-30 seq112825 109 1e-21 seq422 73.4 7e-11 >seq231405 Length=1467 Score = 196 bits (216), Expect = 9e-48 Identities = 203/260 (78%), Gaps = 6/260 (2%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| ||| || ||| |||||||||||||||| Sbjct 412 CTTCTTAGAGGGACGAGTGGCGTTTAGCCACACGAAATT-GAG-CAATAACAGGTCTGTG 469 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAG--TTCAT 188 |||||||||||||| | ||||||||||||||||||||||| || || || | | | | Sbjct 470 ATGCCCTTAGATGTCCGGGGCCGCACGCGCGCTACACTGAAGGAATCAGCGTGGATGCCT 529 Query 189 CACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCAT 248 | ||| | ||| |||| |||| || | | || ||| ||||||| ||||| | | | Sbjct 530 C-CCTGGCCCGAAAGGGTTGGGAAACCCGTTGAATCTCCTTCGTGCTAGGGATTGGGGCT 588 Query 249 TGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGA 308 || || | || | | | |||||||||| || |||||||||| ||||| ||| |||||||| Sbjct 589 TGTAACTGTTCCCCATGAACGAGGAATTCCCAGTAAGCGCGAGTCATAAGCTCGCGTTGA 648 Query 309 TTACGTCCCTGCCCTTTGTA 328 |||||||||||||||||||| Sbjct 649 TTACGTCCCTGCCCTTTGTA 668 >seq212967 Length=2176 Score = 138 bits (152), Expect = 2e-30 Identities = 167/219 (76%), Gaps = 9/219 (4%) Strand=Plus/Minus Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACT-GACA 172 ||||||||||||||||||||||||||||||| | ||| |||||||||||||||| || | Sbjct 424 GCAATAACAGGTCTGTGATGCCCTTAGATGTCCGAGGCTGCACGCGCGCTACACTGGAGA 365 Query 173 GAGCCAACGAGTTCAT-CACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCG 231 | | | ||| | | ||| | | |||| ||||||| | || | |||| ||| Sbjct 364 GTTCAGAATGTTTCTTCCTACTTCGACAGAAG---TGGGTAACCATGAAATTCTCT-TCG 309 Query 232 TG-CTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGC-G 289 || ||||| |||| ||||||||||| | |||||||||||| |||||||||| | Sbjct 308 TGACTGGGATCGGAGC-TTGCAATTATTCTCCGTCAACGAGGAATTCCTAGTAAGCACTA 250 Query 290 TGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | ||||||| | | | |||||| ||||||| |||||||| Sbjct 249 TTTCATCAGAATGTGCTGATTATGTCCCTGTCCTTTGTA 211 >seq112825 Length=307 Score = 109 bits (120), Expect = 1e-21 Identities = 96/118 (81%), Gaps = 5/118 (4%) Strand=Plus/Minus Query 110 TGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTG 169 || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 118 TGGGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACACGCGCTACACTG 59 Query 170 ACAGAGCCAACGAGTTCATCACCTTGGC-CGGAAGGTCTGGGTAATCTTGTTAAACTC 226 | ||| || || ||| || |||| || |||| |||||| | |||||||| Sbjct 58 AAGGAGGCAGCGTGTTTGTC----TGGCTCGAAAGGGTCGGGTAACCCGTTTAAACTC 5 >seq422 Length=315565 Score = 73.4 bits (80), Expect = 7e-11 Identities = 90/122 (74%), Gaps = 1/122 (1%) Strand=Plus/Plus Query 201 AAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGC 260 |||| |||| || || | || ||| ||||||| | ||| | | ||| || | || | Sbjct 236380 AAGGGTTGGGAAACCTGTTGAATCTCCTTCGTGCTAGAGATTGGGGCTTGTAACTGTTCC 236439 Query 261 TCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGC 320 | |||||||||| || |||||||||| || || | | ||||||||||||||||||| Sbjct 236440 CGATGAACGAGGAATTCCCAGTAAGCGCGAGTTAT-ATCTAGCGTTGATTACGTCCCTGC 236498 Query 321 CC 322 || Sbjct 236499 CC 236500 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944060969728