Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq294514 392 1e-106 seq212967 230 7e-58 seq120342 93.3 1e-16 seq116969 91.5 4e-16 >seq294514 Length=903 Score = 392 bits (434), Expect = 1e-106 Identities = 396/506 (78%), Gaps = 28/506 (6%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||||||||||| | || | |||||| || |||| ||||| | ||||||||| Sbjct 766 GTACTCATTCCAATTACGGGGCCTCGAAAGAGTCCCGTATTGTTATTTTTCGTCACTACC 707 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 706 TCCCCGTGCCGGGAGTGGGTAAGTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 647 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 |||||| |||||||||||||||||||||||| ||||||||||||||||| | |||||| Sbjct 646 TTCTCATGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTACAAACATGGT 587 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| | | ||||||||| | ||||||||||||| ||||||| || | ||||| || Sbjct 586 AGGCATATCACGTACCATCGACATTTGATAGGGCAGACATTTGAAAGATGCGTCGCCAGC 527 Query 240 TC-AAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCAA---GGA------GCCCC 287 | | ||||||||||| | ||||||| || ||||||| ||| ||||| Sbjct 526 ACTAGGGCCATGCGATCAGCACAAAGTTATCCAGAGTCACCAATCGGGACGCCGCGCCCC 467 Query 288 G--------AAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTC--CGA-AGTCGGG 336 | || |||| | | |||| | |||||||| | | | ||| ||| ||||| Sbjct 466 GCGAAGGGCAACGGCGATTGGTTTTGAACTAATAAAAGCGCTCTTTCCACGAGGGTCGGA 407 Query 337 GTTT--TTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTA-AGGTACTA 393 | || | |||||||||||||||||||||| |||| |||||||| |||| | || | | Sbjct 406 GCTTGGTAAGCATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAGGATAGTTTTCA 347 Query 394 TCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTAT 453 || ||||||| |||||||||||||||||||||| ||||||| || ||| | | Sbjct 346 TCTAATAAACATCGACTGATTTAATGAGCCATTCGCGGTTTCACCGT-GAGACAGTGTGA 288 Query 454 ACTTAGACATGCATGGCTTAATCTTT 479 ||||||||||||||||||||||| || Sbjct 287 ACTTAGACATGCATGGCTTAATCATT 262 >seq212967 Length=2176 Score = 230 bits (254), Expect = 7e-58 Identities = 335/462 (73%), Gaps = 25/462 (5%) Strand=Plus/Plus Query 43 TATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 102 ||||| | ||||||||||| ||| | | || |||||||||||||||||||||||||||| Sbjct 1367 TATTTCTCTTCACTACCTCCTCGTTTTGAGAGTGGGTAATTTGCGCGCCTGCTGCCTTCC 1426 Query 103 TTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTA 162 ||||| ||||| |||||||||||||| ||||||| ||| | |||||| |||| | || | Sbjct 1427 TTGGAAGTGGTCGCCGTTTCTCAGGCGGCCTCTCCAGAACCAAACCCTGATTCTCTGT-A 1485 Query 163 CCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTG 222 | |||| |||| ||||| | || |||| || |||||||||| | |||| | ||| Sbjct 1486 CTCGTTACAACCACGGTAGACATATAATGTACCGTCTAAAGTTGATAAGTCAGACACTTG 1545 Query 223 AATGAACCATCGCCGGCTCAA-GGCCATGCGATT--CGTTAAGTTATTATGAATCACCAA 279 || || ||| || | ||| || ||| |||| | |||||||| || ||||||| Sbjct 1546 AAAGATATGTCGTCGACACAAAGGTCATACGATCAACACAAAGTTATTTAGAGTCACCAA 1605 Query 280 GGAGCC---CCGAAGGGCG---TTG--GTTTTTTATCTAATAAATACACCCCTTCCGAAG 331 | | |||| | | | | | |||| |||||||||| || |||||| Sbjct 1606 CAAACAGTTCCGATGAAAGAACTAGAAGGTTTTGATCTAATAAAAGCA----TTCCGATA 1661 Query 332 TCG-----GGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTAT-CCATGTAGTA 385 | | || |||| |||||||||||| | | || || ||||||| |||| ||| | Sbjct 1662 TTGCTACCGGAATTTTCGCATGTATTAGCCCAGGCTTTTCCTCGGTTATTCCATTTAGGA 1721 Query 386 AGGTACTATCAAATAAACG-ATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAG 444 | || |||||| ||| ||| ||||| ||||||||| | ||||||||||| || | Sbjct 1722 -GTTATGATCAAAGAAAGTTATAGCTGATGTAATGAGCCGTACGCAGTTTCACCTTAAAC 1780 Query 445 ATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAA 486 | | ||||||||||||||||||||||||||| ||| || Sbjct 1781 CA-GTTCATACTTAGACATGCATGGCTTAATCTTCAAGATAA 1821 >seq120342 Length=404475 Score = 93.3 bits (102), Expect = 1e-16 Identities = 111/146 (76%), Gaps = 6/146 (4%) Strand=Plus/Minus Query 296 TTGGTTTTTTATCTAATAAATACACCCCTTCCGAAG--TCGGGGTTT--TTAGCATGTAT 351 |||||||| | |||||||| | | | |||| || |||| | || | ||||||| | Sbjct 215006 TTGGTTTTGAA-CTAATAAAAGCGCTCTTTCCCGAGGGTCGGAGCTTGGTAAGCATGTTT 214948 Query 352 TAGCTCTAGAATTACCACGGTTATCCATGTAGTA-AGGTACTATCAAATAAACGATAACT 410 ||||||||||||| |||| |||||||| |||| | || | ||| ||||||| || | Sbjct 214947 TAGCTCTAGAATTGCCACTGTTATCCAAGTAGGATAGTTTTCATCGAATAAACATAAAAT 214888 Query 411 GATTTAATGAGCCATTCGCAGTTTCA 436 ||||||||||||||||| |||||| Sbjct 214887 GATTTAATGAGCCATTCAAGGTTTCA 214862 >seq116969 Length=301 Score = 91.5 bits (100), Expect = 4e-16 Identities = 75/90 (83%), Gaps = 1/90 (1%) Strand=Plus/Plus Query 393 ATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTA 452 ||| ||||||| |||||||||||||||||||||| ||||||| || ||| | | Sbjct 213 ATCTAATAAACATCGACTGATTTAATGAGCCATTCGCGGTTTCACCGT-GAGACAGTGTG 271 Query 453 TACTTAGACATGCATGGCTTAATCTTTGAG 482 ||||||||||||||||||||||||||||| Sbjct 272 AACTTAGACATGCATGGCTTAATCTTTGAG 301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1505394519296