Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_011356.1 Length=54896 Score E Sequences producing significant alignments: (Bits) Value seq329764 104 8e-18 >seq329764 Length=630 Score = 104 bits (114), Expect = 8e-18 Identities = 302/463 (65%), Gaps = 13/463 (3%) Strand=Plus/Plus Query 3160 AACATGTAATCGCATTCAACCTGCTTATTTCCAGTAAATGGCTTATCGTCAGGATTACCC 3219 |||||||||||||| || |||||||||| | |||| ||||| | ||| || | Sbjct 11 AACATGTAATCGCACTCTGCCTGCTTATTGGCTTTAAAGGGCTTCTTTGCAGTTACACAC 70 Query 3220 CAACAGCAATTACCCTTGGGCCACCCATGTACTTTCCGTACTCTTCCGTTAACAACGTGA 3279 || ||| || || ||||| || || | ||| ||| | || || || || || Sbjct 71 CAGTCGCAGTTTCCGACCGGCCAACCGTGAATTTTTTTTACACGGCCCTTCACGACATGG 130 Query 3280 AGTAATCCCCAGCCAGGTGGTAAATCCTCAATTGAAATAATTCCCGGCTCACTAATAAAG 3339 ||||| ||||| || || | ||| || || | ||||| |||||||| ||||| Sbjct 131 AGTAACCCCCAACCTTCAGGAAGATCTTCGATACGGACTATTCCAGGCTCACTGATAAAA 190 Query 3340 AATCGCCAGTCGCCCATTCCAAGAGACGGATTTTTACGAAAACGCTTTTTTCTATCTGCC 3399 ||||||||||| ||||| || ||| | |||| || || |||| ||| || Sbjct 191 AATCGCCAGTCACCCATGCCTTTCTCCGGCTCGATACGGAATTCTTTCTTTCGATCAGCA 250 Query 3400 AACAAGTCAGCACGAGAACATTTCGC--CAATCAGGCATGATGCTGAATTTCTGAATCCC 3457 | |||||| || || || || || || | | || || ||||| || | || || Sbjct 251 AGCAAGTCTGCTCGGGAGCACTTTGCCTCTAGGAGACAGGATGCACCGTTACGAAAACCG 310 Query 3458 ATAGCATCTGGCTGTTCTCCGGTACTGGTTACA-GCTATAAAGCGGTCATGAAAACAAAC 3516 || ||||| | ||| || || || | | || ||| | |||||||||||||| || Sbjct 311 ATTGCATCAGCCTGCTC-CCCATATGGAGTCCATGCTTTGAAGCGGTCATGAAATGCGAC 369 Query 3517 CTTGAAACCGTTGCGCTTAAGGAACTTGTACGCAATCTGACAGAGTTCGCGGTGTGTTAA 3576 || || ||||| | | ||| || | | | ||||| || ||||| ||| ||||| Sbjct 370 TTTAAAGCCGTTACTTTGAAGAAATCTCCATCCTATCTGGCAAAGTTCATCGTGGGTTAA 429 Query 3577 CG---------CCATATCACTCTCCTTTGATGCGAATGCCAGC 3610 | ||| ||||||||| || | || |||||| || Sbjct 430 TGGGATTAAATTCATTTCACTCTCCCTTCACGCCAATGCCTGC 472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 174854760149796