Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Biomphalaria_20glabrata_20[refseq_20GCF_5F000457365.1_202013-09-06] 331,401 sequences; 916,388,084 total letters Query= NC_023503.1 Length=48800 Score E Sequences producing significant alignments: (Bits) Value seq101527 205 3e-48 seq94849 122 3e-23 >seq101527 Length=647993 Score = 205 bits (226), Expect = 3e-48 Identities = 286/399 (72%), Gaps = 8/399 (2%) Strand=Plus/Plus Query 2518 AAATACCCAATCATCACTATCGAAGATGGTATGGACGAAAACGACTGGGACGG--TTG-- 2573 ||||||||||| || | || |||||||| | ||| | ||||| ||||| ||| Sbjct 251488 AAATACCCAATTATTTCAATTGAAGATGGATTAAGTGAACATGACTGAGACGGATTTGTT 251547 Query 2574 GAAATCTCTTACTGAACGTCTTGGTGGTAAAGTTCAATTGGTTGGTGACGACTTCTTCGT 2633 ||||| | ||| | ||| |||| | ||| | || || || ||||| || || Sbjct 251548 GAAATG----AAAAAACAGTTAGGTCATAAAATCCAAATTGTAGGAGATGACTTATTTGT 251603 Query 2634 AACTAACACTGCTTACCTTGAAAAAGGTATTGCAGAACACGCTGCTAACTCAATCCTTAT 2693 || ||| | | || |||||||||||| | || | ||||| || |||| | || Sbjct 251604 TACAAACCCAAGTATTCTGAAAAAAGGTATTGAAAAAGATGCTGCCAATGCAATTTTGAT 251663 Query 2694 CAAAGTTAACCAAATCGGTACTTTGACTGAAACTTTTGACGCTATCGAAATGGCGAAAGA 2753 ||| |||||||||| ||| | || || ||||| ||||| ||||| |||||||| ||| Sbjct 251664 TAAAATTAACCAAATTGGTTCATTAACAGAAACATTTGATGCTATTGAAATGGCTAAAAC 251723 Query 2754 AGCTGGATACACAGCAGTAGTATCACACCGTTCAGGTGAAACTGAAGATTCAACAATCGC 2813 |||||||| ||| || || |||||||||||||||||| | |||||| |||| || || Sbjct 251724 AGCTGGATGAACAAATGTTGTTTCACACCGTTCAGGTGAATCAGAAGATACAACGATTGC 251783 Query 2814 TGATATTGCAGTTGCAACTAACGCTGGTCAAATTAAGACAGGTTCATTGTCACGTACTGA 2873 ||| ||||||||||| || | ||||||||||| ||||| ||| ||||| | ||||| Sbjct 251784 TGACATTGCAGTTGCTTTAAATACAGGTCAAATTAAAACAGGATCAATGTCAAGAACTGA 251843 Query 2874 CCGTATTGCTAAATACAACCAATTGCTTCGTATCGAAGA 2912 | || || ||||| || || || || | || ||||| Sbjct 251844 TAGAATAGCAAAATATAATCAGTTACTAAGAATTGAAGA 251882 Score = 165 bits (182), Expect = 3e-36 Identities = 364/542 (67%), Gaps = 8/542 (1%) Strand=Plus/Plus Query 1667 TAATGTCAATTATTACTGATGTCTACGCACGTGAAGTCCTTGACTCACGCGGTAACCCAA 1726 ||||||||| |||| | | | | || |||||||| | || ||||| ||||| |||| Sbjct 250622 TAATGTCAAAAATTATTTACATACATGCTCGTGAAGTATTAGATTCACGTGGTAATCCAA 250681 Query 1727 CACTTGAAGTAGAAGTTTACACTGAATCTGGTGCATTCGGTCGCGGTATGGTTCCTTCAG 1786 | ||||||| || ||| | ||||||| |||| ||| || | | ||| |||||||| | Sbjct 250682 CTATTGAAGTTGATGTTGAAACTGAATTAGGTGGATTTGGAAGAGCTATCGTTCCTTCTG 250741 Query 1787 GAGCATCAACTGGTGAACACGAAGCAGTAGAACTTCGTGATGGTGACAAAGCTCGTTACG 1846 | || |||||||||||| ||||| ||||| | | ||||| |||||| |||||| | Sbjct 250742 GTGCTTCAACTGGTGAATTAGAAGCTCTAGAATTAAGAGATGGCGACAAAAGTCGTTATG 250801 Query 1847 GTGGTCTTGGTACTCAAAAAGCAGTTGATAACGTAAACAACGTTATTGCTGAGCACATCA 1906 | ||| ||| | || || || ||||||||||||| |||| ||| | | || | Sbjct 250802 GAGGTAAAGGTGTTTTAACCGCTATTAATAACGTAAACAAAATTATCGCTCCGAAAATTA 250861 Query 1907 TCGGATTC-GACGTA----CGTGATCAACAAG--GTATTGACCGCGCAATGATCGCTCTT 1959 | ||| | || || | | |||| ||| || ||| |||||||| | Sbjct 250862 T-TGATGCTGAGTTAGATTCTTTATCACAAAGACACATCGACGAATTAATGATCGAATTA 250920 Query 1960 GACGGTACTCCAAACAAAGGTAAACTTGGTGCCAACGCTATTCTTGGTGTGTCTATCGCT 2019 || || || || ||| ||| | || || ||||| || |||||||| || || ||| Sbjct 250921 GATGGAACAGATAATAAAAAGAAATTGGGAGCTAACGCAATCCTTGGTGTTTCAATGGCT 250980 Query 2020 GTAGCACGCGCAGCTGCTGACTACCTTGAAGTTCCACTTTACAGCTACCTTGGCGGATTC 2079 ||| | || ||| || | | | | |||| || | || || | || ||| Sbjct 250981 TGTGCAAGAGCTAGTGCGGATGAGTTAGGAATTCCGCTATTTAGATATTTAGGTGGAACT 251040 Query 2080 AACACTAAAGTTCTTCCAACTCCAATGATGAACATCATCAACGGTGGTTCTCACTCAGAC 2139 || || | | | ||| || ||| | ||||| ||||| |||||| |||| | || Sbjct 251041 AATGCTTATACTTTGCCAGTGCCTATGCTAAACATTATCAATGGTGGTGCTCATGCTGAT 251100 Query 2140 GCTCCAATCGCTTTCCAAGAATTTATGATTGTACCTGCTGGTGCACCAACATTCAAAGAA 2199 |||||| ||||||||||||||||||||||| | |||||| |||| |||||| Sbjct 251101 AACTCAATCGACTTCCAAGAATTTATGATTGTACCAGTTGGTGCTAGTTCATTTAAAGAA 251160 Query 2200 GC 2201 || Sbjct 251161 GC 251162 >seq94849 Length=338 Score = 122 bits (134), Expect = 3e-23 Identities = 157/217 (72%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 2753 AAGCTGGATACACAGCAGTAGTATCACACCGTTCAGGTGAAACTGAAGATTCAACAATCG 2812 |||| |||| |||||| | || |||||||||||||||||| | ||||| ||||||| | Sbjct 21 AAGCAGGATTCACAGCTATCGTTTCACACCGTTCAGGTGAATCAGAAGACACAACAATTG 80 Query 2813 CTGATATTGCAGTTGCAACTAACGCTGGTCAAATTAAGACAGGTTCATTGTCACGTACTG 2872 |||| | ||||||| ||||| || |||||||| ||||||||| ||||| | || | Sbjct 81 CTGACCTATCAGTTGCTCTAAACGCAGGACAAATTAAAACAGGTTCAATGTCAAGAACAG 140 Query 2873 ACCGTATTGCTAAATACAACCAATTGCTTCGTATCGAAGACCAACTTGGTGAAGTTGCAG 2932 | | || || ||||||||| | | || ||| ||||| |||| ||| | || | Sbjct 141 ATAGAATAGCAAAATACAACAGACTTCTAGCTATTGAAGAAGAACTAGGTCTAACAGCTG 200 Query 2933 AATACCGTGGTTTGAAATCATTCTACAACTTGAAAAA 2969 || |||| | ||| ||||| | ||| | ||||| Sbjct 201 CATTTGATGGTGTTAAAACATTCCATAACCTAAAAAA 237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 155424328528644