Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Botryllus_20schlosseri_20[genbank_20GCA_5F000444245.1_202013-08-07]
120,139 sequences; 579,633,380 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq111391 214 3e-53
seq95707 214 3e-53
seq95691 214 3e-53
seq107237 206 4e-51
seq6452 196 7e-48
>seq111391
Length=3646
Score = 214 bits (236), Expect = 3e-53
Identities = 198/245 (81%), Gaps = 7/245 (3%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||| |
Sbjct 2865 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCGCGCTTACTGGGAATT-C 2808
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|||||| || |||||||||||| | ||||||| |||||| ||||| | ||
Sbjct 2807 CTCGTTCGAGGGCAACAATTGCAAGGCCCTATCCCAATCACGGACGGGGTTCAACGGGTT 2748
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||||||||| |||||| || | |||||| ||| || |||||||||||||||
Sbjct 2747 ACCCGGACCCTTCGGCCCGGGCG---GACTCGCTGATCCGCCCAATGTAGCGCGCGTGCG 2691
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAA 239
|||| |||||||||||||||||||||||||||||||| ||| | || |||||| ||||
Sbjct 2690 GCCCCGAACATCTAAGGGCATCACAGACCTGTTATTG-CTCGATCTCGCGTGGCTAAAAA 2632
Query 240 GGCCA 244
||||
Sbjct 2631 CGCCA 2627
>seq95707
Length=3822
Score = 214 bits (236), Expect = 3e-53
Identities = 183/219 (84%), Gaps = 8/219 (4%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||| |
Sbjct 954 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCGCGCTTACTGGGAATT-C 897
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|||||| || |||||||||||| | ||||||| |||||| ||||| | ||
Sbjct 896 CTCGTTCGAGGGCAACAATTGCAAGGCCCTATCCCAATCACGGACGGGGTTCAACGGGTT 837
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATC-AGTGTAGCGCGCGTGC 178
|||||||||| |||||| || | ||||| ||| | | || ||||||||||||||||
Sbjct 836 ACCCGGACCTCTCGGCCCGGGCGC---ACTCGCTGA-TCCGTCCAGTGTAGCGCGCGTGC 781
Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217
||||| |||||||||||||||||||||||||||||||||
Sbjct 780 GGCCCCGAACATCTAAGGGCATCACAGACCTGTTATTGC 742
>seq95691
Length=3218
Score = 214 bits (236), Expect = 3e-53
Identities = 183/219 (84%), Gaps = 8/219 (4%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||| |
Sbjct 430 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCGCGCTTACTGGGAATT-C 487
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|||||| || |||||||||||| | ||||||| |||||| ||||| | ||
Sbjct 488 CTCGTTCGAGGGCAACAATTGCAAGGCCCTATCCCAATCACGGACGGGGTTCAACGGGTT 547
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATC-AGTGTAGCGCGCGTGC 178
|||||||||| |||||| || | ||||| ||| | | || ||||||||||||||||
Sbjct 548 ACCCGGACCTCTCGGCCCGGGCGC---ACTCGCTGA-TCCGTCCAGTGTAGCGCGCGTGC 603
Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217
||||| |||||||||||||||||||||||||||||||||
Sbjct 604 GGCCCCGAACATCTAAGGGCATCACAGACCTGTTATTGC 642
>seq107237
Length=10426
Score = 206 bits (228), Expect = 4e-51
Identities = 182/219 (83%), Gaps = 6/219 (3%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||| |
Sbjct 2361 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCGCGCTTACTGGGAATT-C 2304
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|||||| || |||||||||||| | ||||||| |||||| ||||| | ||
Sbjct 2303 CTCGTTCGAGGGCAACAATTGCAAGGCCCTATCCCAATCACGGACGGGGTTCAACGGGTT 2244
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATC-AGTGTAGCGCGCGTGC 178
|||||||||| |||||| || | ||||| ||| | | || ||||||||||||||||
Sbjct 2243 ACCCGGACCTCTCGGCCCGGGAGGGC-ACTCGCTGA-TCCGTCCAGTGTAGCGCGCGTGC 2186
Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217
||||| ||||||||||| |||||||||||||||||||||
Sbjct 2185 GGCCCCGAACATCTAAGAGCATCACAGACCTGTTATTGC 2147
>seq6452
Length=7885
Score = 196 bits (216), Expect = 7e-48
Identities = 179/217 (82%), Gaps = 8/217 (4%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||| |
Sbjct 1669 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCGCGCTTACTGGGAATT-C 1612
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|||||| || |||||||||||| | ||||||| |||||| ||||| | ||
Sbjct 1611 CTCGTTCGAGGGCAACAATTGCAAGGCCCTATCCCAATCACGGACGGGGTTCAACGGGTT 1552
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAG-ACTCGTTGAATACATC-AGTGTAGCGCGCGTG 177
||| |||||| |||||| || | | ||||| ||| | | || |||||||||||||||
Sbjct 1551 ACCGGGACCTCTCGGCCCCGG--ACGGCACTCGCTGA-TCCGTCCAGTGTAGCGCGCGTG 1495
Query 178 CGGCCCAGAACATCTAAGGGCATCACAGACCTGTTAT 214
||||| ||||||||||||||||||||||||||||||
Sbjct 1494 CGGCCTCGAACATCTAAGGGCATCACAGACCTGTTAT 1458
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751124787385
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |