Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryllus_20schlosseri_20[genbank_20GCA_5F000444245.1_202013-08-07] 120,139 sequences; 579,633,380 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq111391 187 5e-45 seq95707 170 4e-40 seq95691 170 4e-40 seq117896 95.1 2e-17 seq104009 95.1 2e-17 seq82785 84.2 4e-14 seq31158 78.8 2e-12 seq102140 77.0 6e-12 seq3417 75.2 2e-11 seq95274 73.4 7e-11 seq12909 73.4 7e-11 >seq111391 Length=3646 Score = 187 bits (206), Expect = 5e-45 Identities = 194/248 (78%), Gaps = 5/248 (2%) Strand=Plus/Plus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT-GCTCGAATACATTAGCATGG 132 |||||||||||||||||||||||||||||||||| ||| || | ||| | |||||| Sbjct 1973 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGTTTTTCGCCTGCATAGTGTTGCATGG 2032 Query 133 AATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGT-TTCTAG-GACCGCCGTAATGAT 190 |||||| ||||| ||| | |||| ||| ||||| ||| | | || |||||||| Sbjct 2033 AATAATGGAATAAGACCT-CGGTCTCGTTTCGTTGGCGTTCGCGAGTGCGAGGTAATGAT 2091 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 | | ||||| || |||||| ||| ||| || || ||||||||||||||||||| Sbjct 2092 TGAGAGGGACAGCCGGGGGCGTCCGTACTCTGCCGTTAGAGGTGAAATTCTTGGATCGGC 2151 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 |||||| ||||||||||||||||||| ||||| |||||||| ||||||| || ||||| Sbjct 2152 GGAAGACGAACTACTGCGAAAGCGTTCGCCAAGAATGTTTTCTTTAATCA-AGAGCGAAA 2210 Query 311 GTTAGGGG 318 || || || Sbjct 2211 GTCAGAGG 2218 >seq95707 Length=3822 Score = 170 bits (188), Expect = 4e-40 Identities = 192/251 (76%), Gaps = 11/251 (4%) Strand=Plus/Plus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT----TAGCA 129 |||||||||||||||||||||||||||||||||||| || || | ||| | ||| Sbjct 64 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCC---GCCCGCCTGCATAGTGTCGCA 120 Query 130 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGT-TTCTAGG-ACCGCCGTAAT 187 |||||||| ||||||||| | |||| ||| ||||| ||| || | || ||||| Sbjct 121 TGGAATAACGGAATAGGACCT-CGGTCTCGTTTCGTTGGCGTTCGCGGGAGCGAGGTAAT 179 Query 188 GATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATT 247 |||||| ||||| | |||||| ||| ||| || ||||||||||||||||||||| Sbjct 180 GATTAAGAGGGACGGCCGGGGGCGTCCGTACTCTGCCGTCAGAGGTGAAATTCTTGGACC 239 Query 248 TATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACG 307 |||||| | | |||||||||||||| ||||| | |||||| ||||||| || || Sbjct 240 GGCGGAAGACGAGCAGCTGCGAAAGCGTTCGCCAAGAACGTTTTCTTTAATCA-AGAGCG 298 Query 308 AAAGTTAGGGG 318 ||||| || || Sbjct 299 AAAGTCAGAGG 309 >seq95691 Length=3218 Score = 170 bits (188), Expect = 4e-40 Identities = 192/251 (76%), Gaps = 11/251 (4%) Strand=Plus/Minus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT----TAGCA 129 |||||||||||||||||||||||||||||||||||| || || | ||| | ||| Sbjct 1320 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCC---GCCCGCCTGCATAGTGTCGCA 1264 Query 130 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGT-TTCTAGG-ACCGCCGTAAT 187 |||||||| ||||||||| | |||| ||| ||||| ||| || | || ||||| Sbjct 1263 TGGAATAACGGAATAGGACCT-CGGTCTCGTTTCGTTGGCGTTCGCGGGAGCGAGGTAAT 1205 Query 188 GATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATT 247 |||||| ||||| | |||||| ||| ||| || ||||||||||||||||||||| Sbjct 1204 GATTAAGAGGGACGGCCGGGGGCGTCCGTACTCTGCCGTCAGAGGTGAAATTCTTGGACC 1145 Query 248 TATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACG 307 |||||| | | |||||||||||||| ||||| | |||||| ||||||| || || Sbjct 1144 GGCGGAAGACGAGCAGCTGCGAAAGCGTTCGCCAAGAACGTTTTCTTTAATCA-AGAGCG 1086 Query 308 AAAGTTAGGGG 318 ||||| || || Sbjct 1085 AAAGTCAGAGG 1075 >seq117896 Length=20173 Score = 95.1 bits (104), Expect = 2e-17 Identities = 104/136 (76%), Gaps = 8/136 (6%) Strand=Plus/Minus Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99 ||| |||||||| |||| | || | | | |||||||||||||||| ||||||| Sbjct 501 TGCTCTTCACTGAGTGTTCGTGGTGGGCGACAAGTTTACTTTGAAAAAATCGGAGTGTTT 442 Query 100 AAAGCAGGCCTTTGCTCGAATACAT----TAGCATGGAATAATAGAATAGGACGTGCGGT 155 ||| |||| ||||||| ||||| | ||||||||||| ||||||||| | |||| Sbjct 441 AAATCAGG---TTGCTCGCCTACATGTTGTTGCATGGAATAACGGAATAGGACCT-CGGT 386 Query 156 TCTATTTTGTTGGTTT 171 | |||||||||||||| Sbjct 385 TGTATTTTGTTGGTTT 370 >seq104009 Length=6482 Score = 95.1 bits (104), Expect = 2e-17 Identities = 92/116 (79%), Gaps = 8/116 (7%) Strand=Plus/Minus Query 84 AAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT----TAGCATGGAATAATA 139 ||||||||||||||||||| | |||| | |||| |||| | |||||||||||| Sbjct 1986 AAAAATTAGAGTGTTCAAATCTGGCC---GGTCGACAACATAGTGTTGCATGGAATAATG 1930 Query 140 GAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATA 195 ||||||||| | | ||| |||||||||||||| | | || |||||||||||||| Sbjct 1929 GAATAGGACCT-CAGTTGTATTTTGTTGGTTTACGGAAGCGACGTAATGATTAATA 1875 >seq82785 Length=7165 Score = 84.2 bits (92), Expect = 4e-14 Identities = 106/142 (75%), Gaps = 9/142 (6%) Strand=Plus/Minus Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99 ||| |||||||| |||| | || | | | ||||||||||||||||| |||||| Sbjct 6071 TGCTCTTCACTGAGTGTTCGTGGTGGGCGACAAGTTTACTTTGAAAAAATTGAAGTGTTT 6012 Query 100 AAAGCAGGCCTTTGCTCGAATACAT----TAGCATGGAATAATAGAATAGGACGTGCGGT 155 ||| |||| | | ||| ||||| | ||||||||||| ||||||||| | ||| Sbjct 6011 AAATCAGG---TCGGTCGCCTACATATTGTTGCATGGAATAACGGAATAGGACCT-TGGT 5956 Query 156 TCTATTTTGTTGGTTTCTAGGA 177 | |||||||||||||| ||||| Sbjct 5955 TGTATTTTGTTGGTTT-TAGGA 5935 >seq31158 Length=3775 Score = 78.8 bits (86), Expect = 2e-12 Identities = 94/124 (76%), Gaps = 4/124 (3%) Strand=Plus/Minus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAA--TACATTAGCATG 131 |||| || | |||||||| |||||||||| |||||| | | | || || | ||||| Sbjct 1504 TTTAATTCGGAAAAATTACAGTGTTCAAATCAGGCCGGT-CGCCAACGTAGTGTTGCATG 1446 Query 132 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATT 191 ||||||| ||||||||| | | ||| |||||||||||||| | | || | |||| || Sbjct 1445 GAATAATGGAATAGGACCT-CAGTTGTATTTTGTTGGTTTACGGAAGCGACATAATTATA 1387 Query 192 AATA 195 |||| Sbjct 1386 AATA 1383 >seq102140 Length=5334 Score = 77.0 bits (84), Expect = 6e-12 Identities = 82/104 (79%), Gaps = 11/104 (11%) Strand=Plus/Minus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT-TA-----G 127 ||||||| ||||||||||||||||||||||||||| | ||| | ||| || | Sbjct 3303 TTTACTTA-AAAAAATTAGAGTGTTCAAAGCAGGCC---GGTCGCCTGCATATAGCGGTG 3248 Query 128 CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTT 171 |||||| |||| | ||||||| | | ||||||| |||||||||| Sbjct 3247 CATGGATTAATGGGATAGGACCT-CAGTTCTATATTGTTGGTTT 3205 >seq3417 Length=11763 Score = 75.2 bits (82), Expect = 2e-11 Identities = 86/114 (75%), Gaps = 9/114 (8%) Strand=Plus/Plus Query 81 TGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAATAATAG 140 |||||||||||||||||||||| | |||| ||| | |||||||||||| | Sbjct 5523 TGAAAAAATTAGAGTGTTCAAATC--GCCTAC------ATAGTGTTGCATGGAATAATGG 5574 Query 141 AATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAAT 194 ||| ||| | ||||| |||||||||||||| | | || | ||||||||||| Sbjct 5575 AATGGGATCT-CGGTTGTATTTTGTTGGTTTTCGGAAGCGACATAATGATTAAT 5627 >seq95274 Length=8672 Score = 73.4 bits (80), Expect = 7e-11 Identities = 88/116 (76%), Gaps = 9/116 (8%) Strand=Plus/Minus Query 85 AAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT----TAGCATGGAATAATAG 140 |||||||||||||||||| |||||| | ||| |||| | |||||||||||| | Sbjct 8473 AAAATTAGAGTGTTCAAATCAGGCC---GGTCGCCAACATGGTGTTGCATGGAATAATGG 8417 Query 141 AATAGGACGTGCGGTTCTATTTTG-TTGGTTTCTAGGACCGCCGTAATGATTAATA 195 |||| | | | | ||| ||||||| ||||||| | || |||||||||||||| Sbjct 8416 AATATGCCCT-CAGTTGTATTTTGTTTGGTTTACGTTAGCGACGTAATGATTAATA 8362 >seq12909 Length=10732 Score = 73.4 bits (80), Expect = 7e-11 Identities = 94/126 (75%), Gaps = 9/126 (7%) Strand=Plus/Plus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGG- 132 ||||||||| |||||||||| |||||||| |||||| | ||| ||||| || ||| Sbjct 9917 TTTACTTTGGAAAAATTAGATTGTTCAAATCAGGCC---GGTCGCCTACAT-AGTGTGGT 9972 Query 133 ---AATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGA 189 |||||| |||||||| | | || |||||||||||||| | | ||||||| Sbjct 9973 GGGAATAATGGAATAGGATATTAG-TTGTATTTTGTTGGTTTACGGAAGATAGGTAATGA 10031 Query 190 TTAATA 195 |||||| Sbjct 10032 TTAATA 10037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914100487872