Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryllus_20schlosseri_20[genbank_20GCA_5F000444245.1_202013-08-07] 120,139 sequences; 579,633,380 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq108633 316 3e-84 seq112311 302 8e-80 seq50081 250 4e-64 seq2962 118 2e-24 seq102336 84.2 4e-14 seq103668 82.4 1e-13 seq110744 78.8 2e-12 seq104286 75.2 2e-11 seq81857 75.2 2e-11 >seq108633 Length=9497 Score = 316 bits (350), Expect = 3e-84 Identities = 248/295 (84%), Gaps = 1/295 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGT-CATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| ||||||| | | | | ||| | ||||||| ||||||||||| ||||||| Sbjct 168 TACTGAGCAGAATTACTGTCGCGACAACGCTTCATCAGTGAGGTAAAACTAAACTGTCTC 227 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | ||||||||||||||||||||||||||||||| || | ||||||| |||||| || || Sbjct 228 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTTGTCGTTGAACAAGCCAACGGTTGGCG 287 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct 288 AATTCTGCTTCGCAATGACAGGAAGAGCAGACATCGAAGGATCAAAAAGCAACGTCGCTA 347 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 ||||||||||||||||| |||||||||||| ||||||||||||||||| |||||| ||| Sbjct 348 TGAACGCTTGGCTGCCATAAGCCAGTTATCTCTGTGGTAACTTTTCTGTCACCTCCAGCT 407 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294 | ||| | | | | ||||||||||| ||| | ||||| ||| ||||||| Sbjct 408 TGAAACTCGCAAGCGTTGAAGGATCGATAAGCCGCGCTTTCGCGGTCCGTATTCA 462 >seq112311 Length=2247 Score = 302 bits (334), Expect = 8e-80 Identities = 193/209 (92%), Gaps = 1/209 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGT-CATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| ||||||| | | | | ||| | |||||||||||||||||||||||||||| Sbjct 66 TACTGAGCAGAATTACTGTCGCGACAACGCTTCATCAGTAGGGTAAAACTAACCTGTCTC 125 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | ||||||||||||||||||||||||||||||| |||||||||||||||||||||| || Sbjct 126 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTTGTGGGTGAACAATCCAACGCTTGGCG 185 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 186 AATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 245 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTAT 208 ||||||||||||||||||||||||||||| Sbjct 246 TGAACGCTTGGCTGCCACAAGCCAGTTAT 274 >seq50081 Length=12361 Score = 250 bits (276), Expect = 4e-64 Identities = 175/198 (88%), Gaps = 1/198 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGT-CATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| || |||| | | | | ||| | |||||||||||| ||||||||| ||||| Sbjct 4402 TACTGAGCAGAGTTACTGTCGTGACAACGCTTCATCAGTAGGGTTAAACTAACCGGTCTC 4343 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | ||||||||||||||||||||||||||||||| |||||||||||||||||||||| || Sbjct 4342 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTTGTGGGTGAACAATCCAACGCTTGGCG 4283 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 4282 AATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCATCGTCGCTA 4223 Query 180 TGAACGCTTGGCTGCCAC 197 ||||||||| ||| ||| Sbjct 4222 TGAACGCTTTTCTGTCAC 4205 >seq2962 Length=7019 Score = 118 bits (130), Expect = 2e-24 Identities = 85/98 (87%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 134 ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTG 193 |||| ||||||||||||||| |||||||||| |||||| ||||| || | ||||| || Sbjct 3755 ATGACAGGAAGAGCCGACATGAAAGGATCAAATAGCAACTTCGCTCAGACCACTTGGATG 3814 Query 194 CCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCAC 231 |||||||||||||||||||| || |||||||||| ||| Sbjct 3815 CCACAAGCCAGTTATCCCTGCGGCAACTTTTCTGACAC 3852 >seq102336 Length=4003 Score = 84.2 bits (92), Expect = 4e-14 Identities = 79/98 (81%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 198 AAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAG-GGACT 256 ||| | |||||||||||||||||||||||| |||||| || ||| || ||| | | || Sbjct 280 AAGGCCGTTATCCCTGTGGTAACTTTTCTGTCACCTCCAG-CTCGAAACTCGCGAGCGCT 222 Query 257 AAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294 ||||||||||||||| | ||||| ||| ||||||| Sbjct 221 GAAGGATCGATAGGCCGCGCTTTCGCGGTCCGTATTCA 184 >seq103668 Length=8565 Score = 82.4 bits (90), Expect = 1e-13 Identities = 75/92 (82%), Gaps = 2/92 (2%) Strand=Plus/Minus Query 204 GTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAG-GGACTAAAGGA 262 |||||||||||||||||||||||| |||||| || ||| || ||| | | || ||||| Sbjct 3673 GTTATCCCTGTGGTAACTTTTCTGTCACCTCCAG-CTCGAAACTCGCGAGCGCTGAAGGA 3615 Query 263 TCGATAGGCCACACTTTCATGGTTTGTATTCA 294 |||||||||| | ||||| ||| ||||||| Sbjct 3614 TCGATAGGCCGCGCTTTCGCGGTCCGTATTCA 3583 >seq110744 Length=6167 Score = 78.8 bits (86), Expect = 2e-12 Identities = 70/88 (80%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 207 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGA 266 ||||||||||||||||||||| |||||| ||| | ||| | | | || ||||||||| Sbjct 683 ATCCCTGTGGTAACTTTTCTGTCACCTCCAGCTTGAAACTCGCAAGCGCTGAAGGATCGA 742 Query 267 TAGGCCACACTTTCATGGTTTGTATTCA 294 |||||| | ||||| ||| ||||||| Sbjct 743 TAGGCCGCGCTTTCGCGGTCCGTATTCA 770 >seq104286 Length=2468 Score = 75.2 bits (82), Expect = 2e-11 Identities = 72/93 (77%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 202 CAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGG 261 || ||||| |||||||||||||| || |||||| ||| | ||| | | | || |||| Sbjct 747 CACTTATCACTGTGGTAACTTTTNTGTCACCTCCAGCTTGAAACTCGCAAGCGCTGAAGG 688 Query 262 ATCGATAGGCCACACTTTCATGGTTTGTATTCA 294 ||||||||||| | ||||| ||| ||||||| Sbjct 687 ATCGATAGGCCGCGCTTTCNCGGTCCGTATTCA 655 >seq81857 Length=3324 Score = 75.2 bits (82), Expect = 2e-11 Identities = 61/73 (84%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGT-CATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| ||||||| | | | | ||| | |||||||||||||||||| ||||||||| Sbjct 180 TACTGAGCAGAATTACTGTCGCGACAACGCTTCATCAGTAGGGTAAAACTGACCTGTCTC 239 Query 60 ATGACGGTCTAAA 72 | ||||||||||| Sbjct 240 ACGACGGTCTAAA 252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 853373532384