Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryllus_20schlosseri_20[genbank_20GCA_5F000444245.1_202013-08-07] 120,139 sequences; 579,633,380 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq111391 96.9 2e-18 seq107237 93.3 3e-17 seq95691 93.3 3e-17 seq95707 87.8 1e-15 seq6452 84.2 1e-14 >seq111391 Length=3646 Score = 96.9 bits (106), Expect = 2e-18 Identities = 70/77 (91%), Gaps = 3/77 (4%) Strand=Plus/Minus Query 48 TCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGAC 107 ||||||||| || ||||| ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 2906 TCTCACTAAACC-TTTCAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGAC 2849 Query 108 GTAATACAACGCAAGCT 124 ||||| |||||| |||| Sbjct 2848 GTAAT-CAACGCGAGCT 2833 >seq107237 Length=10426 Score = 93.3 bits (102), Expect = 3e-17 Identities = 69/77 (90%), Gaps = 3/77 (4%) Strand=Plus/Minus Query 48 TCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGAC 107 ||||||||| || || || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 2402 TCTCACTAAACCGTT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGAC 2345 Query 108 GTAATACAACGCAAGCT 124 ||||| |||||| |||| Sbjct 2344 GTAAT-CAACGCGAGCT 2329 >seq95691 Length=3218 Score = 93.3 bits (102), Expect = 3e-17 Identities = 69/77 (90%), Gaps = 3/77 (4%) Strand=Plus/Plus Query 48 TCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGAC 107 ||||||||| || || || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 389 TCTCACTAAACCGTT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGAC 446 Query 108 GTAATACAACGCAAGCT 124 ||||| |||||| |||| Sbjct 447 GTAAT-CAACGCGAGCT 462 >seq95707 Length=3822 Score = 87.8 bits (96), Expect = 1e-15 Identities = 67/76 (88%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| || || || ||||||||| |||||||||| |||||||||||||||||||| Sbjct 994 CTCACTAAACCGTT-CAATCGGTAGTA-GCGACGGGCGNTGTGTACAAAGGGCAGGGACG 937 Query 109 TAATACAACGCAAGCT 124 |||| |||||| |||| Sbjct 936 TAAT-CAACGCGAGCT 922 >seq6452 Length=7885 Score = 84.2 bits (92), Expect = 1e-14 Identities = 58/63 (92%), Gaps = 2/63 (3%) Strand=Plus/Minus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||||| ||||||||||| |||||||||||||||||||||||| |||||| | Sbjct 1697 TTCAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGA 1640 Query 122 GCT 124 ||| Sbjct 1639 GCT 1637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300461208020