Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryllus_20schlosseri_20[genbank_20GCA_5F000444245.1_202013-08-07] 120,139 sequences; 579,633,380 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq111391 77.0 4e-12 seq95707 73.4 5e-11 seq95691 73.4 5e-11 >seq111391 Length=3646 Score = 77.0 bits (84), Expect = 4e-12 Identities = 76/96 (79%), Gaps = 2/96 (2%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCGTAA 72 ||||| ||| | ||| | ||| ||||| |||||||||||| | ||| | |||| || Sbjct 2067 CCAACGAAAC-GAGACCGAGGTCTTATTCCATTATTCCATGCAACACTATGCAGGCGAAA 2009 Query 73 G-CCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 ||||||||||||||||||||||| |||| ||||| Sbjct 2008 AACCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 1973 >seq95707 Length=3822 Score = 73.4 bits (80), Expect = 5e-11 Identities = 77/99 (78%), Gaps = 8/99 (8%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTA----ATGTATTCGGGC 68 ||||| ||| | ||| | ||||||||| ||||||||||| | ||| | ||||| Sbjct 158 CCAACGAAAC-GAGACCGAGGTCCTATTCCGTTATTCCATGCGACACTATGCAGGCGGGC 100 Query 69 GTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | |||||||||||||||||||||||| |||| ||||| Sbjct 99 G---GCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 64 >seq95691 Length=3218 Score = 73.4 bits (80), Expect = 5e-11 Identities = 77/99 (78%), Gaps = 8/99 (8%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTA----ATGTATTCGGGC 68 ||||| ||| | ||| | ||||||||| ||||||||||| | ||| | ||||| Sbjct 1226 CCAACGAAAC-GAGACCGAGGTCCTATTCCGTTATTCCATGCGACACTATGCAGGCGGGC 1284 Query 69 GTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | |||||||||||||||||||||||| |||| ||||| Sbjct 1285 G---GCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 1320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594507278526