Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryllus_20schlosseri_20[genbank_20GCA_5F000444245.1_202013-08-07] 120,139 sequences; 579,633,380 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq95707 230 4e-58 seq95691 228 2e-57 seq111391 221 2e-55 seq107237 219 8e-55 seq6452 212 1e-52 >seq95707 Length=3822 Score = 230 bits (254), Expect = 4e-58 Identities = 247/315 (78%), Gaps = 13/315 (4%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGG--GTCG-CCGGCTTCT 76 || |||||| | | |||||||||| | || | | ||||| | || || ||||| Sbjct 646 GAACGAGACTCTGGCATGCTAAATAGTTACGCGANCCTCGGCGGTCGGCGTCCAACTTCT 705 Query 77 TAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCC 135 ||||||||||| ||| | |||| || | | ||| ||||||||||||||||||||| Sbjct 706 TAGAGGGACTAGTGGCGTTTAGCCACACGA-GATCGAG-CAATAACAGGTCTGTGATGCC 763 Query 136 CTTAGATGTTCTGGGCCGCACGCGCGCTACACTG-ACAGAGCCAACGAGTTCATCACCTT 194 ||||||||||| |||||||||||||||||||||| || || | | ||||| | || Sbjct 764 CTTAGATGTTCGGGGCCGCACGCGCGCTACACTGGACGGATC-AGCGAGTGCG---CCCG 819 Query 195 GGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTC-GTGCTGGGGATAGAGCATTGCAA 253 ||||| ||||| |||||| | ||| ||| | ||| ||| | ||||||| || |||||| Sbjct 820 GGCCGAGAGGTCCGGGTAACCC-GTTGAACCCCGTCCGTGATTGGGATAGGGCCTTGCAA 878 Query 254 TTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACG 313 || |||| || |||||||||| || |||||||||| ||||||||| ||||||||||||| Sbjct 879 TTGTTGCCCTCGAACGAGGAATTCCCAGTAAGCGCGAGTCATCAGCTCGCGTTGATTACG 938 Query 314 TCCCTGCCCTTTGTA 328 ||||||||||||||| Sbjct 939 TCCCTGCCCTTTGTA 953 >seq95691 Length=3218 Score = 228 bits (252), Expect = 2e-57 Identities = 247/315 (78%), Gaps = 13/315 (4%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGG--GTCG-CCGGCTTCT 76 || |||||| | | |||||||||| | || | | ||||| | || || ||||| Sbjct 738 GAACGAGACTCTGGCATGCTAAATAGTTACGCGACCCTCGGCGGTCGGCGTCCAACTTCT 679 Query 77 TAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCC 135 ||||||||||| ||| | |||| || | | ||| ||||||||||||||||||||| Sbjct 678 TAGAGGGACTAGTGGCGTTTAGCCACACGA-GATCGAG-CAATAACAGGTCTGTGATGCC 621 Query 136 CTTAGATGTTCTGGGCCGCACGCGCGCTACACTG-ACAGAGCCAACGAGTTCATCACCTT 194 ||||||||||| |||||||||||||||||||||| || || | | ||||| | || Sbjct 620 CTTAGATGTTCGGGGCCGCACGCGCGCTACACTGGACGGATC-AGCGAGTGCG---CCCG 565 Query 195 GGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTC-GTGCTGGGGATAGAGCATTGCAA 253 ||||| ||||| |||||| | ||| ||| | ||| ||| | ||||||| || |||||| Sbjct 564 GGCCGAGAGGTCCGGGTAACCC-GTTGAACCCCGTCCGTGATTGGGATAGGGCCTTGCAA 506 Query 254 TTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACG 313 || |||| || |||||||||| || |||||||||| ||||||||| ||||||||||||| Sbjct 505 TTGTTGCCCTCGAACGAGGAATTCCCAGTAAGCGCGAGTCATCAGCTCGCGTTGATTACG 446 Query 314 TCCCTGCCCTTTGTA 328 ||||||||||||||| Sbjct 445 TCCCTGCCCTTTGTA 431 >seq111391 Length=3646 Score = 221 bits (244), Expect = 2e-55 Identities = 244/317 (77%), Gaps = 15/317 (5%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGG----CTTC 75 || |||||| | | |||||||||| | || | | ||||| ||| || |||| Sbjct 2555 GAACGAGACTCTGGCATGCTAAATAGTTACGCGACCCTCGGCGG-TCGGCGTGAAACTTC 2613 Query 76 TTAGAGGGACTATCGGC---TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGAT 132 |||||||||||| ||| | |||| | | || | ||| |||||||||||||||||| Sbjct 2614 TTAGAGGGACTAGTGGCGTTTTTAGCC-ACGCGAGATCGAG-CAATAACAGGTCTGTGAT 2671 Query 133 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACC 192 |||||||||||||| ||||||||||||||||||| || | || ||||| | || Sbjct 2672 GCCCTTAGATGTTCGGGGCCGCACGCGCGCTACATTGGGCGGATCAGCGAGTCCG---CC 2728 Query 193 TTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTC-GTGCTGGGGATAGAGCATTGC 251 ||||| | |||| |||||| | ||| ||| | ||| ||| | ||||||| || |||| Sbjct 2729 CGGGCCGAAGGGTCCGGGTAACCC-GTTGAACCCCGTCCGTGATTGGGATAGGGCCTTGC 2787 Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311 |||| |||| || |||||||||| || |||||||||| ||||||||| ||||||||||| Sbjct 2788 AATTGTTGCCCTCGAACGAGGAATTCCCAGTAAGCGCGAGTCATCAGCTCGCGTTGATTA 2847 Query 312 CGTCCCTGCCCTTTGTA 328 ||||||||||||||||| Sbjct 2848 CGTCCCTGCCCTTTGTA 2864 >seq107237 Length=10426 Score = 219 bits (242), Expect = 8e-55 Identities = 237/300 (79%), Gaps = 13/300 (4%) Strand=Plus/Plus Query 36 TGCTAAATAGCCAGGCCCGCTTTGGCGG--GTCG-CCGGCTTCTTAGAGGGACTATCGGC 92 |||||||||| | || | | ||||| | || || |||||||||||||| | ||| Sbjct 2067 TGCTAAATAGTTACGCGACCCTCGGCGGTCGGCGTCCAACTTCTTAGAGGGACCAGTGGC 2126 Query 93 -TCAAGCCG-ATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGG 150 | |||| ||| || | || |||||||||||||||||||| ||||||||||| ||| Sbjct 2127 GTTTAGCCACATG--AGATCTAG-CAATAACAGGTCTGTGATGCTCTTAGATGTTCGGGG 2183 Query 151 CCGCACGCGCGCTACACTG-ACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGG 209 ||||||||||||||||||| || || | | ||||| | | || ||||| ||||| || Sbjct 2184 CCGCACGCGCGCTACACTGGACGGATC-AGCGAGTGCC-CTCCCGGGCCGAGAGGTCCGG 2241 Query 210 GTAATCTTGTTAAACTCTGTC-GTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAAC 268 |||| | ||| ||| | ||| ||| | ||||||| || |||||||| |||| || ||| Sbjct 2242 GTAACCC-GTTGAACCCCGTCCGTGATTGGGATAGGGCCTTGCAATTGTTGCCCTCGAAC 2300 Query 269 GAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||||||| || |||||||||| ||||||||| |||||||||||||||||||||||||||| Sbjct 2301 GAGGAATTCCCAGTAAGCGCGAGTCATCAGCTCGCGTTGATTACGTCCCTGCCCTTTGTA 2360 >seq6452 Length=7885 Score = 212 bits (234), Expect = 1e-52 Identities = 243/316 (77%), Gaps = 12/316 (4%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGC----TTC 75 || |||||| | | |||||||||| | || | | ||||| ||| || | ||| Sbjct 1358 GAACGAGACTCTGGCATGCTAAATAGTTACGCGACCCTCGGCGG-TCGGCGTCAAACTTC 1416 Query 76 TTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGC 134 |||||||||||| ||| | |||| || | | ||| |||||||||||||||||| Sbjct 1417 TTAGAGGGACTAGTGGCGTTTAGCCACAAGA-GATCGAGCATATAACAGGTCTGTGATGC 1475 Query 135 CCTTAGATGTTCTGGGCCGCACGCGCGCTACACTG-ACAGAGCCAACGAGTTCATCACCT 193 |||||||||||| ||||||||||||||||||||| || || | | ||||| | || Sbjct 1476 CCTTAGATGTTCGAGGCCGCACGCGCGCTACACTGGACGGATC-AGCGAGTGCCGT-CCG 1533 Query 194 TGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTC-GTGCTGGGGATAGAGCATTGCA 252 ||||| ||||| ||||| | ||| ||| | ||| ||| | ||||||| || ||||| Sbjct 1534 GGGCCGAGAGGTCCCGGTAACCC-GTTGAACCCCGTCCGTGATTGGGATAGGGCCTTGCA 1592 Query 253 ATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTAC 312 ||| |||| || |||||||||| || |||||||||| ||||||||| |||||||||||| Sbjct 1593 ATTGTTGCCCTCGAACGAGGAATTCCCAGTAAGCGCGAGTCATCAGCTCGCGTTGATTAC 1652 Query 313 GTCCCTGCCCTTTGTA 328 |||||||||||||||| Sbjct 1653 GTCCCTGCCCTTTGTA 1668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946062043392