Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryllus_20schlosseri_20[genbank_20GCA_5F000444245.1_202013-08-07] 120,139 sequences; 579,633,380 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq3604 248 7e-61 seq116056 244 8e-60 seq25502 82.4 6e-11 >seq3604 Length=7407 Score = 248 bits (274), Expect = 7e-61 Identities = 988/1522 (65%), Gaps = 71/1522 (5%) Strand=Plus/Minus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 ||| || |||||||| || || | ||| || | ||| || | |||||| ||||| ||||| Sbjct 5408 ATCCACTGTGAACTGAATGGCTTGAGCTGCTGGCTTCGTTCGAAGATAATACATCCCGGT 5349 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCA-TAATTCGGCT 65195 |||||| || | ||| | || |||||||| | | | | |||| || || |||| Sbjct 5348 CTTGAGTCCGACCTTCCACCCGTAAAAATGCAT-GCTAGTCAGCTTGCCGTAGTTAGGCT 5290 Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255 | || | || || ||||| ||||| || |||||||| | | || || || |||| Sbjct 5289 CCGCGATGTGAATGTTCAAACTTTGACTTTGGTCGATGTACGGTGCCCGGTCGGCTGCCA 5230 Query 65256 TGTCAATGATACGACGTCC-CGATATCTCCCAGACGGTCTTGTACAGG--CGACGTA-CC 65311 | | ||||| | || ||| |||||||| ||||| |||| | | || || Sbjct 5229 TTTTGATGATGTT-CTTCTGCGAAATCTCCCACACGGTACGATACAATTCCTTCATATCC 5171 Query 65312 TCAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAA--TGCGA--TT 65367 ||| ||||||| |||| ||| | || || ||| |||| ||| | || Sbjct 5170 TCA---GGAATCTGAGGGATGTTCTGAATCGATCCGTTGTTTGCGATAAGCTGCAACTTT 5114 Query 65368 ACG-CATCGACTCTGA--CCACAAACC--CAAATCGATAAGATGTTGAACCAAGTGACGA 65422 ||| ||||| | || || | | |||||| || || | || || || Sbjct 5113 ACGTCATCGTTCCAGATACCTCTTTCTGTCAAATCCATGAG---TAGA------TGCTGA 5063 Query 65423 TTGATGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGT 65482 || | | ||||| ||||||||||| |||||||| || |||||| ||| || Sbjct 5062 TTTACAATCTGGAATTCGCCGGACAGCACACGACGCGTGTAAATGTTGCTGGTGTATGGC 5003 Query 65483 TCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACC 65542 |||| || |||| | || || || ||||| ||||| ||||| |||||||| || || | | Sbjct 5002 TCAATGGCTTCATTATTACCCAGTATTTGAGCAGTGGATGCTGTTGGCATCGGCGCTAAC 4943 Query 65543 AACAATGAGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCAC 65602 | || || || || | ||||| | ||| || || | ||| |||| | |||| Sbjct 4942 AGCAGAGAATTACGTACTCCGTGCTTTTTGATCTTCTCTTTCAAAGACGCCCAATCCCAC 4883 Query 65603 ATCGGTTTATC-GTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGC 65661 | ||| || | || ||| ||||| ||| | || | || ||| | Sbjct 4882 AA------ATCAGTGGGGGTC-ACGCCCCACAAATCATACTGTAATTGACCTTGGCTGAC 4830 Query 65662 CGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACA-GCTGGTCT 65720 || || || | || || ||| || ||| | ||||||| || | | | | Sbjct 4829 AGGAGATCCCTCATAGCTCTCATACGGACCGCTCTCTTCCGCAAGTTCGCAAGACGCTGT 4770 Query 65721 CGAGTGCGGCAAAATAAATGGTCTCGAAAATG-CGTCGATTAAGTTCACGTGCCTCATCG 65779 | | || || ||||||||||||||||| || | || | | |||| | ||||| | Sbjct 4769 CAAA-GCCGCGAAATAAATGGTCTCGAATATTTCAACGTTGAGCTTCATG-GCCTCGGGG 4712 Query 65780 CTCTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCG 65839 || || ||||||| | || || || ||| | ||| || || ||||| |||||||||||| Sbjct 4711 CTGTCAAACGGCATTCGCAACATGATAAAGGCGTCCGCGAGCCCTTGCACTCCAATACCG 4652 Query 65840 ATGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCG 65899 || ||||| || | || || ||| ||||| | ||||||||||||||| ||||| || Sbjct 4651 ATTGGACGGTGCCTCATGTTCGAATTCCTCGCTTGAGGTACAGGGTAGTAGTTGATGTCA 4592 Query 65900 ATAATGCGATTCAAATTGCGTGTCACCA-CATGCACGATACGTCG--CAATTGTTCGAAA 65956 || || |||| ||| ||||| || | | ||||| |||||| ||||| || |||| Sbjct 4591 ATGATTTTGTTCAGATTCCGTGTGACTACCTTGCAC---ACGTCGTACAATTTTTTGAAA 4535 Query 65957 TCAAAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGAT 66016 ||| | ||| | || | | ||| | ||| | || | || Sbjct 4534 TCATA--CTTTCCGTCGTTGG-------------TTACATAACGGGGCAATGCGATCGAA 4490 Query 66017 GCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGA 66076 ||||| || || || || | |||||| ||| || || ||||| || ||||| ||| Sbjct 4489 GCGAGATTACATACGGCCACCTCGTCCTTGCTGGTGTATTCTACAATCTCAGTGCAGAGA 4430 Query 66077 TTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTG 66136 || || || ||||||| ||| | ||||| || ||||| || || ||| Sbjct 4429 TTCGAGCTTTTGATCGTGCCCAGATTTTTCTGATTTGATTTTTTGTTGCAAGCGTCTTTG 4370 Query 66137 TACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCG 66196 || | ||||||||| || ||||| || | || ||||| |||||||||| ||| || Sbjct 4369 TAGAGCATGTACGGCGTACCGGTTTCGATCTGCGACTCGATGATGGCGTACCACAGTTTT 4310 Query 66197 CGTGCCTTCACCGTACGTAC-CGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTC 66255 | || || | || | | | ||| || ||| ||| || | ||||| || | || Sbjct 4309 TGCGCTTTGATTGT-CTTCCTCGCTCTCCCTGCTTTTTCATACTTCTCGTAAAGCTTATC 4251 Query 66256 GAAGGATTCACCCCATACTTCGGACAGAC--ATGGACACTTGTGTGGACACATCAGCGAC 66313 || ||||| | || ||| || || || | | | || || || | |||||| Sbjct 4250 AAATTCATCACCATAAACGTCGACCAAACCAATCGCTTCAT-TG-GGGCAAAATAGCGAC 4193 Query 66314 CAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAG 66373 ||||| |||| ||| || || |||||| | ||| |||||||| | |||||||| Sbjct 4192 CAATCTCCATTGCTTTCAACCCGTTTCATAAACAAATCCGGTATCCACATCGCGTAGAAA 4133 Query 66374 AGATCGCGTGCTCGTTGCTCCTCAATGCC-GTGAT-TTTTGCGCAAGTCGAGGAACTCAA 66431 || || || |||| | ||| || |||| ||| | |||| ||| ||| | || |||| Sbjct 4132 AGGTCCCGAGCTCTTGACTCATCTTTGCCGGTGTTCTTTTTCGC--GTCTAAAAAGTCAA 4075 Query 66432 AGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCAC 66491 ||| || |||||||| ||||| ||||| | || || | || | ||| || | Sbjct 4074 AGACATCCGCATGCCACGGTTCGAGGTACACCGCAAATGCACCTGGCCTTTTATTACCGC 4015 Query 66492 CTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAG 66551 ||||||| ||||| || || |||||| | ||||||| ||| || | ||| ||||| | Sbjct 4014 CTTGGTCTACGTAACGTGCCGTGTTGTTGTAAACACGCAGCATAGGCAAGAGACCGTTCG 3955 Query 66552 ATTTGCCATTGGTGCCGTCGAT 66573 | || || || ||||| |||| Sbjct 3954 AGTTTCCGTTAGTGCCTGCGAT 3933 >seq116056 Length=8111 Score = 244 bits (270), Expect = 8e-60 Identities = 992/1526 (65%), Gaps = 79/1526 (5%) Strand=Plus/Minus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 ||| || ||||||||||| || | ||| |||| ||| || | |||||| ||||| || || Sbjct 2974 ATCCACTGTGAACTGGATGGCTTGAGCCGCCGGCTTCGTTCGAAGATAATACATCCCCGT 2915 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCA-TAATTCGGCT 65195 |||||| || | ||| | || |||||||| | || | | |||| || || |||| Sbjct 2914 CTTGAGTCCGACCTTCCACCCGTAAAAATGCAT-GCTGGTCAACTTGCCGTAGTTAGGCT 2856 Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255 |||| | || || ||||| ||||| || |||||||| | | || || ||||||| Sbjct 2855 CGGCGATGTGAATGTTCAAACTTTGACTTTGGTCGATGTACGGTGCCCGGTCGGCAGCCA 2796 Query 65256 TGTCAATGATACGACGTCC-CGATATCTCCCAGACGGTCTTGTACAGG--CGACGTA-CC 65311 | | ||||| | || ||| |||||||| ||||| |||| | | || || Sbjct 2795 TTTTGATGATGTT-CTTCTGCGAAATCTCCCACACGGTACGATACAATTTCTTCATATCC 2737 Query 65312 TCAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGT--GCAATAA--TGCGA-- 65365 ||| ||||||| |||| || | ||||| | || || || | ||| | Sbjct 2736 TCA---GGAATCTGAGGGATGTTTTGAATCGAACC--GTTGTTAGCGATGAGCTGCAACT 2682 Query 65366 TTACG-CATCGACTCTGA--CCACAAACC--CAAATCGATAAGATGTTGAACCAAGTGAC 65420 |||| ||||| | || || | | |||||| || || | ||| | Sbjct 2681 TTACATCATCGTTCCAGATACCTCTTTCTGTCAAATCCATGAG----TAAAC-----GCT 2631 Query 65421 GATTGATGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGG 65480 |||| | | ||||| ||||||||||| ||||| || || |||||| ||| | Sbjct 2630 GATTTACAATCTGGAATTCGCCGGACAGCACACGTCGCGTGTAAATGTTGCTAGTGTATG 2571 Query 65481 GTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGA 65540 | |||| || |||| | || || || ||||| ||||| ||||| |||||||| || || | Sbjct 2570 GCTCAATGGCTTCATTATTACCCAGTATTTGAGCAGTGGATGCTGTTGGCATCGGCGCTA 2511 Query 65541 CCAACAATGAGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCC 65600 || || || || || | ||||| | ||| || || | ||| |||| | || Sbjct 2510 ACAGCAGAGAATTGCGTACTCCGTGCTTTTTGATCTTCTCTTTCAAAGACGCCCAATCCC 2451 Query 65601 ACATCGGTTTATC-GTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTG 65659 ||| ||| || | || ||| ||||| ||| | || | || ||| Sbjct 2450 ACAA------ATCAGTGGGGGTC-ACGCCCCACAAATCATACTGTAATTGACCTTGGCTG 2398 Query 65660 GCCGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACA-GCTGGT 65718 || || || | || || ||| || ||| | ||||||| || | | | Sbjct 2397 ATAGGAGATCCCTCATAGCTCTCATACGGACCGCTCTCTTCCGCAAGTTCGCAAGACGCT 2338 Query 65719 CTCGAGTGCGGCAAAATAAATGGTCTCGAAAATG-CGTCGATTAAGTTCACGTGCCTCAT 65777 || | || || ||||||||||||||||| || | || | | |||| | ||||| Sbjct 2337 GTCAAA-GCCGCGAAATAAATGGTCTCGAATATTTCAACGTTGAGCTTCATG-GCCTCGG 2280 Query 65778 CGCTCTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATAC 65837 ||| ||| | ||||| | || || || ||| | ||| ||||| ||||| |||||||||| Sbjct 2279 GGCTGTCGAATGGCATTCGCAACATGATAAAGGCGTCCGCCAGTCCTTGCACTCCAATAC 2220 Query 65838 CGATGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATAT 65897 |||| ||||| || | || || ||| ||||| | ||| || |||||||| ||||| | Sbjct 2219 CGATCGGACGGTGCCTCATGTTCGAATTCCTCGCTTGAGGCACGGGGTAGTAGTTGATGT 2160 Query 65898 CGATAATGCGATTCAAATTGCGTGTCACCA-CATGCACGATACGTCG--CAATTGTTCGA 65954 | || || |||| ||| ||||| || | | ||||| |||||| ||||| || || Sbjct 2159 CAATGATTTTGTTCAGATTCCGTGTGACGACCTTGCAC---ACGTCGTACAATTTTTTGA 2103 Query 65955 AATCAAAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAG 66014 ||||| | | | | |||| || || | ||| | || | | Sbjct 2102 AATCATACTTT------CCATCGTTGGT---------TACGTATCGGGGCAATGCGATCG 2058 Query 66015 ATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACA 66074 | ||||| || || || || | |||||| ||| || || ||||| || ||||| | Sbjct 2057 AAGCGAGATTACACACGGCCACCTCGTCCTTGCTGGTGTATTCTACAATCTCAGTGCAGA 1998 Query 66075 GATTACTGCAGCGT---ATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCAT 66131 |||| || ||| | || ||||||| || | |||||| || ||||| || | Sbjct 1997 GATT--TG-AGCTTTTGATCGTGCCCAGATCTTTTTGATTTGATTTTTTGTTGCAAGCGT 1941 Query 66132 CCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAA 66191 | ||||| | ||||||||| || ||||| || | || ||||| |||||||||| ||| | Sbjct 1940 CTTTGTAGAGCATGTACGGCGTACCGGTTTCGATCTGCGACTCGATGATGGCGTACCATA 1881 Query 66192 GAGCGCGTGCCTTCACCGTACGTAC-CGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGG 66250 | | || || | || | | | ||| || ||| ||| || | |||||||| Sbjct 1880 GTTTTTGCGCTTTGATTGT-CTTCCTCGCTCTCCCTGCTTTTTCATACTTCTCGTAGAGC 1822 Query 66251 TGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTT-GTGTGGACACATCAG 66309 | || || ||||| |||| ||| || || | | ||| | || || | || Sbjct 1821 TTATCAAACTCATCACCATATACGTCGACCAAACCT-ATCGCTTCATTGGGGCAAAATAG 1763 Query 66310 CGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTA 66369 ||||||||| |||| ||| || || |||||| | ||| |||||||| | ||||| Sbjct 1762 CGACCAATCCCCATTGCTTTCAACCCGTTTCATAAACAAATCCGGTATCCACATCGCGTA 1703 Query 66370 GAAGAGATCGCGTGCTCGTTGCTCCTCAATG-CCGTGAT-TTTTGCGCAAGTCGAGGAAC 66427 ||| || || ||||| | | || || || ||||| | |||| ||| ||| | || Sbjct 1702 GAAAAGGTCCCGTGCCCTTGATTCATCTTTGCCCGTGTTCTTTTTCGC--GTCTAAAAAG 1645 Query 66428 TCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCG 66487 ||||||| || |||||||| || || ||||| | ||||| | || | ||| Sbjct 1644 TCAAAGACATCCGCATGCCACGGCTCGAGGTACACCGCGAATGCACCTGGCCTTTTATTA 1585 Query 66488 CCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCG 66547 || |||||||| ||||| || || || || | ||||||| ||| || | ||| ||| Sbjct 1584 CCGCCTTGGTCTACGTAACGTGCTGTGTTATTATAAACACGCAGCATGGGCAAGAGACCG 1525 Query 66548 TTAGATTTGCCATTGGTGCCGTCGAT 66573 || || || || |||||||| |||| Sbjct 1524 TTGGAGTTTCCGTTGGTGCCTGCGAT 1499 >seq25502 Length=15274 Score = 82.4 bits (90), Expect = 6e-11 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 61510 GTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGA 61569 || ||||| || || ||||| |||||||||||||| || | |||||||||||| ||||| Sbjct 5225 GTTGAGGGCGTGTTCTTCAGCGGATCGTTTGCCGCTATTTATTGGTTGAAGAAGCGTGGG 5166 Query 61570 CTTATGCCCGGTCTGACCTT 61589 | ||||| |||||||| || Sbjct 5165 TTGATGCCGGGTCTGACGTT 5146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396985883294960