Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryllus_20schlosseri_20[genbank_20GCA_5F000444245.1_202013-08-07] 120,139 sequences; 579,633,380 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq9696 93.3 2e-13 >seq9696 Length=23951 Score = 93.3 bits (102), Expect = 2e-13 Identities = 142/197 (72%), Gaps = 4/197 (2%) Strand=Plus/Minus Query 448987 CTCGAGCAACATGGCGTAGGTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTC 449046 ||||| || | || || ||||| |||||||| || | ||||||||||||| | ||| Sbjct 1056 CTCGATCAGCTTGCCGACCGTCATACGCGACGGATACCCGTGCGGGTTCATGACCACGTC 997 Query 449047 GGG-CGTCTCGCCGGCCGCGTTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGA 449105 ||| | || ||| ||||||| |||||||| || || || | ||| || ||| Sbjct 996 GGGGCAGATC-CCGAAATCGTTGAACGGCATGTCTTCCTGGGGCACGATCAGCCCCGTGA 938 Query 449106 CGCCCTTCTGGCCGTGGCGGCTGCAGAACTTGTCCCCCTGCT-CGGGCTTGCGTGTGAAG 449164 |||||||||| ||||| ||| || ||| ||||| || ||| ||||| | | ||| Sbjct 937 CGCCCTTCTGACCGTGTCGGGAGCTGAATTTGTCGCCGAGCTCCGGGCGT-CTTGTTTGA 879 Query 449165 CGCAGCACGATCTTGAT 449181 ||||||| ||| ||||| Sbjct 878 CGCAGCAGGATTTTGAT 862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2081451932413922