Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Branchiostoma_20belcheri_20[refseq_20GCF_5F001625305.1_202016-04-21] 2,308 sequences; 426,123,519 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq1467 102 1e-19 seq1136 102 1e-19 seq2109 98.7 2e-18 seq1539 98.7 2e-18 seq937 98.7 2e-18 seq125 98.7 2e-18 seq979 95.1 2e-17 seq1843 91.5 2e-16 seq336 89.7 8e-16 >seq1467 Length=273372 Score = 102 bits (112), Expect = 1e-19 Identities = 98/123 (80%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| | |||||| ||| | |||| || | || Sbjct 1970 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTTAAGGCGCTCGGCTGATGAGCCGGT 1913 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||||||| |||||||| |||||||||||||||||||||||| ||| Sbjct 1912 GGTGCGAAGCTACCATCTGAGGGATTATGACTGAACGCCTCTAAGTCAGAATCCCGCCCA 1853 Query 121 GAA 123 ||| Sbjct 1852 GAA 1850 >seq1136 Length=385506 Score = 102 bits (112), Expect = 1e-19 Identities = 98/123 (80%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| | |||||| ||| | |||| || | || Sbjct 145884 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTTCAGGCGCTCGGCTGATGAGCCGGT 145827 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||||||||| |||||||| |||||||||||||||||||||||| ||| Sbjct 145826 GGTGCGAAGCTACCATCTGAGGGATTATGACTGAACGCCTCTAAGTCAGAATCCCGACCA 145767 Query 121 GAA 123 ||| Sbjct 145766 GAA 145764 >seq2109 Length=1587233 Score = 98.7 bits (108), Expect = 2e-18 Identities = 97/123 (79%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| | |||||| ||| | |||| || | || Sbjct 107413 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTTCAGGCGCTCGGCTGATGAGCCGGT 107356 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||| ||||||||||| |||||||| |||||||||||||||||||||||| ||| Sbjct 107355 GGTGCGAGGCTACCATCTGAGGGATTATGACTGAACGCCTCTAAGTCAGAATCCCGCCCA 107296 Query 121 GAA 123 ||| Sbjct 107295 GAA 107293 >seq1539 Length=165867 Score = 98.7 bits (108), Expect = 2e-18 Identities = 97/123 (79%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| | |||||| ||| | |||| || | || Sbjct 157258 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTTCAGGCGCTCGGCTGATGAGCCGGT 157315 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||| ||||||||||| |||||||| |||||||||||||||||||||||| ||| Sbjct 157316 GGTGCGAGGCTACCATCTGAGGGATTATGACTGAACGCCTCTAAGTCAGAATCCCGCCCA 157375 Query 121 GAA 123 ||| Sbjct 157376 GAA 157378 >seq937 Length=2088 Score = 98.7 bits (108), Expect = 2e-18 Identities = 97/123 (79%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| | |||||| ||| | |||| || | || Sbjct 773 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTTCAGGCGCTCGGCTGATGAGCCGGT 716 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||| ||||||||||| |||||||| |||||||||||||||||||||||| ||| Sbjct 715 GGTGCGAGGCTACCATCTGAGGGATTATGACTGAACGCCTCTAAGTCAGAATCCCGCCCA 656 Query 121 GAA 123 ||| Sbjct 655 GAA 653 >seq125 Length=1169358 Score = 98.7 bits (108), Expect = 2e-18 Identities = 97/123 (79%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| | |||||| ||| | |||| || | || Sbjct 149150 GTACGAGAGGAACCGCTGG-TTCAGAC-ATTTGGTTCAGGCGCTCGGCTGATAAGCCGGT 149093 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||| ||||||||| |||||||| |||||||||||||||||||||||| ||| Sbjct 149092 GGTGCGAAGTTACCATCTGAGGGATTATGACTGAACGCCTCTAAGTCAGAATCCCGCCCA 149033 Query 121 GAA 123 ||| Sbjct 149032 GAA 149030 >seq979 Length=438673 Score = 95.1 bits (104), Expect = 2e-17 Identities = 91/114 (80%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| | |||||| ||| | |||| || | || Sbjct 2113 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTTCAGGCGCTCGGCTGATGAGCCGGT 2056 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | |||| ||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 2055 GGTGCGAGGCTACCATCTGAGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 2002 >seq1843 Length=27461 Score = 91.5 bits (100), Expect = 2e-16 Identities = 90/114 (79%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||||||| | |||||| ||| | || | || |||| Sbjct 20755 GTACGAGAGGAACCGCAGG-TTCAGAA-ATTTGGTTCAGGCGCTCGGCTAATGAGCCAGT 20698 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | |||||||||||||||| |||||||| |||||||||| ||||||| |||| Sbjct 20697 GGTGCGAAGCTACCATCTGAGGGATTATGACTGAACGCCTTTAAGTCATTATCC 20644 >seq336 Length=836981 Score = 89.7 bits (98), Expect = 8e-16 Identities = 95/123 (77%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| | |||||| ||| | ||| || | || Sbjct 746711 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTTCAGGCGCTCGGCTGTTGAGCCGGT 746768 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||| ||||||||||| ||||||| |||||||||||||||||||||||| ||| Sbjct 746769 GGTGCGAGGCTACCATCTGAGAGATTATGACTGAACGCCTCTAAGTCAGAATCCCGCCCA 746828 Query 121 GAA 123 ||| Sbjct 746829 GAA 746831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819181683712