Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Branchiostoma_20floridae_20[refseq_20GCF_5F000003815.1_202009-05-01] 398 sequences; 521,895,125 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq282 134 6e-30 seq126 134 6e-30 seq108 134 6e-30 seq199 125 3e-27 >seq282 Length=304269 Score = 134 bits (148), Expect = 6e-30 Identities = 92/102 (90%), Gaps = 4/102 (4%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||| Sbjct 31480 GGAAAAGAAACTAACAAGGATTCCCTCAGTAACGGCGAGTGAAGCGGGAAAAGCCCAGCG 31421 Query 61 CCGAATCCCCGC-CCCGCGGTGGGGCGCGGGACATGTGGCGT 101 |||||||||||| ||| | ||||||||||| ||||||||| Sbjct 31420 CCGAATCCCCGCTCCCAC---GGGGCGCGGGAAATGTGGCGT 31382 >seq126 Length=2685315 Score = 134 bits (148), Expect = 6e-30 Identities = 92/102 (90%), Gaps = 4/102 (4%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||| Sbjct 1579343 GGAAAAGAAACTAACAAGGATTCCCTCAGTAACGGCGAGTGAAGCGGGAAAAGCCCAGCG 1579284 Query 61 CCGAATCCCCGC-CCCGCGGTGGGGCGCGGGACATGTGGCGT 101 |||||||||||| ||| | ||||||||||| ||||||||| Sbjct 1579283 CCGAATCCCCGCTCCCAC---GGGGCGCGGGAAATGTGGCGT 1579245 >seq108 Length=2664055 Score = 134 bits (148), Expect = 6e-30 Identities = 92/102 (90%), Gaps = 4/102 (4%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||| Sbjct 1258044 GGAAAAGAAACTAACAAGGATTCCCTCAGTAACGGCGAGTGAAGCGGGAAAAGCCCAGCG 1258103 Query 61 CCGAATCCCCGC-CCCGCGGTGGGGCGCGGGACATGTGGCGT 101 |||||||||||| ||| | ||||||||||| ||||||||| Sbjct 1258104 CCGAATCCCCGCTCCCAC---GGGGCGCGGGAAATGTGGCGT 1258142 >seq199 Length=1763339 Score = 125 bits (138), Expect = 3e-27 Identities = 89/100 (89%), Gaps = 4/100 (4%) Strand=Plus/Minus Query 3 AAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCC 62 ||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct 944101 AAAAGAAACTAACAAGGATTCCCTCAGTAACGGCGAGTGAAGCGGGAAAAGCCCAGCGCC 944042 Query 63 GAATCCCCGC-CCCGCGGTGGGGCGCGGGACATGTGGCGT 101 ||||||| || ||| | ||||||||||| ||||||||| Sbjct 944041 GAATCCCTGCTCCCAC---GGGGCGCGGGAAATGTGGCGT 944005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230399140320