Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Branchiostoma_20floridae_20[refseq_20GCF_5F000003815.1_202009-05-01] 398 sequences; 521,895,125 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq199 75.2 3e-11 >seq199 Length=1763339 Score = 75.2 bits (82), Expect = 3e-11 Identities = 84/106 (79%), Gaps = 6/106 (6%) Strand=Plus/Plus Query 271 CGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTA 330 |||||||| | ||||| |||| | ||| | ||||||||| ||||||||||||||| Sbjct 943744 CGGTTTCACGTGCTATTGAACTCTC-TCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTA 943802 Query 331 CTAGTTCACTATCGGTCAGTC-AGT-AGTATTTAGCCTT-GGAGGA 373 || |||| ||||||||| || || |||||||||||| |||||| Sbjct 943803 CTTGTTCGCTATCGGTC--TCGTGTCCGTATTTAGCCTTAGGAGGA 943846 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241595058432