Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Branchiostoma_20floridae_20[refseq_20GCF_5F000003815.1_202009-05-01] 398 sequences; 521,895,125 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq115 179 5e-40 >seq115 Length=5728022 Score = 179 bits (198), Expect = 5e-40 Identities = 267/379 (70%), Gaps = 0/379 (0%) Strand=Plus/Minus Query 162455 TCTACCAAGCGAGCACCAGTGAGCTTTATGGGCTAGTTCAGGAGACACCCCAGAAAGAAA 162514 |||| |||||| | |||||| | | ||| | || |||||| || |||| |||| Sbjct 3214929 TCTATCAAGCGTCGTCGAGTGAGATGTTTGGCTTGGTGCAGGAGGTGCCACAGAGGGAAA 3214870 Query 162515 CCACTCCAATGTATCCACGATCCCCTTATGGAGTTGCTAAACTATATGGGTTCTGGATCA 162574 |||| ||| | || ||| | || || ||||||| |||||||| || | | |||| | Sbjct 3214869 CCACACCATTCTACCCAAGGTCACCCTATGGAGCAGCTAAACTGTACGCTTACTGGGTTG 3214810 Query 162575 TCAAAAACTACAGGGAAAGCTATGACATACATGCCTCTAGCGGTATTCTATTCAATCACG 162634 | |||||||||||| ||| ||||| ||||| || |||||| || ||||| |||| Sbjct 3214809 TGGTGAACTACAGGGAAGCCTACGACATGTTTGCCTGTAACGGTATCCTCTTCAACCACG 3214750 Query 162635 AAAGCTCACGCAGAGGAGAGACGTTCGTCACACGCAAGATCGTCCGAGCCTTGTCCCGAA 162694 | || |||| || || || || || ||||| | |||||| ||||| || || || Sbjct 3214749 AGAGTCCACGGAGGGGGGAAACCTTTGTCACCAGGAAGATCACCCGAGGGGTGGCCAAAA 3214690 Query 162695 TTAGTGTGGGACTCCAAAGTGATCTACAACTTGGAAACCTCAATGCCCGACGTGACTGGG 162754 || |||| | |||| | | ||| || ||||| |||| ||| ||||||| Sbjct 3214689 TTCTGCTGGGTCAGCAAAACCACATTACACTGGGGAACCTGGATGCTAAACGAGACTGGG 3214630 Query 162755 GACACGCCAAAGACTACGTAGAGGCTATGTGGTTGATGCTTCAGCAAGAGAAGCCAGATG 162814 |||| || || ||||| || | || |||||||||||||| ||||| ||||||||||| | Sbjct 3214629 GACATGCGAAGGACTATGTCAAAGCCATGTGGTTGATGCTACAGCATGAGAAGCCAGAGG 3214570 Query 162815 ATTATGTGATCGCAACTGG 162833 | | ||| || || || || Sbjct 3214569 ACTTTGTTATAGCCACAGG 3214551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 691455759990480