Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq2706 407 2e-111 seq2072 181 2e-43 seq16309 179 6e-43 seq15481 179 6e-43 seq14057 179 6e-43 seq11776 179 6e-43 seq12002 176 7e-42 seq16590 98.7 1e-18 seq10132 93.3 6e-17 >seq2706 Length=2700 Score = 407 bits (450), Expect = 2e-111 Identities = 246/256 (96%), Gaps = 3/256 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | Sbjct 2479 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 2422 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2421 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 2362 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct 2361 CCCGGACCTGTCGGCCAAGGCTATAAACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 2302 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 2301 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGCGGCCTAAAAG 2242 Query 241 GCCAT-CTCCCTCGAA 255 ||| | |||||| || Sbjct 2241 GCCGTAGTCCCTCTAA 2226 >seq2072 Length=3235 Score = 181 bits (200), Expect = 2e-43 Identities = 200/258 (78%), Gaps = 8/258 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||| ||||||| |||||||||| |||||| |||||| | Sbjct 2603 GTACAAAGGGCAGGGACGTAATCAATGCGAGCT-GATGACTCGCACTTACTGGGAATT-C 2546 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||||| | || |||| ||| | ||||| | ||||| | | ||||| | || Sbjct 2545 CTCGTTGACGGGGAAGAATTTCAAGCCCCGATCCCAAGCACGAGGGAGGTTCAACGGGTT 2486 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||| ||| ||| | | || | |||| | ||||||||||||||||||| Sbjct 2485 ACCCAANCCTAACGGGTCAGGACAAACACACATTGATCCCCTCAGTGTAGCGCGCGTGCG 2426 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT-GGCCTAAA 238 |||| | |||||||||||||||||||||||||||||| |||| || ||| ||||| | Sbjct 2425 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCATTCT--CGTGGGCCTTAG 2369 Query 239 AGG-CCATCTCCCTCGAA 255 ||| || | |||||| || Sbjct 2368 AGGCCCTTGTCCCTCTAA 2351 >seq16309 Length=1013 Score = 179 bits (198), Expect = 6e-43 Identities = 200/258 (78%), Gaps = 8/258 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||| ||||||| |||||||||| |||||| |||||| | Sbjct 760 GTACAAAGGGCAGGGACGTAATCAATGCGAGCT-GATGACTCGCACTTACTGGGAATT-C 703 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||||| | || |||| ||| | ||||| | ||||| | | ||||| | || Sbjct 702 CTCGTTGACGGGGAAGAATTTCAAGCCCCGATCCCAAGCACGAGGGAGGTTCAACGGGTT 643 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||| ||| ||| | | || | |||| | ||||||||||||||||||| Sbjct 642 ACCCAACCCTAACGGGTCAGGACAAACACACATTGATCCCCTCAGTGTAGCGCGCGTGCG 583 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT-GGCCTAAA 238 |||| | |||||||||||||||||||||||||||||| |||| || ||| ||||| | Sbjct 582 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCATTCT--CGTGGGCCTTAG 526 Query 239 AGG-CCATCTCCCTCGAA 255 ||| || | |||||| || Sbjct 525 AGGCCCTTGTCCCTCTAA 508 >seq15481 Length=1046 Score = 179 bits (198), Expect = 6e-43 Identities = 200/258 (78%), Gaps = 8/258 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||| ||||||| |||||||||| |||||| |||||| | Sbjct 845 GTACAAAGGGCAGGGACGTAATCAATGCGAGCT-GATGACTCGCACTTACTGGGAATT-C 788 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||||| | || |||| ||| | ||||| | ||||| | | ||||| | || Sbjct 787 CTCGTTGACGGGGAAGAATTTCAAGCCCCGATCCCAAGCACGAGGGAGGTTCAACGGGTT 728 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||| ||| ||| | | || | |||| | ||||||||||||||||||| Sbjct 727 ACCCAACCCTAACGGGTCAGGACAAACACACATTGATCCCCTCAGTGTAGCGCGCGTGCG 668 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT-GGCCTAAA 238 |||| | |||||||||||||||||||||||||||||| |||| || ||| ||||| | Sbjct 667 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCATTCT--CGTGGGCCTTAG 611 Query 239 AGG-CCATCTCCCTCGAA 255 ||| || | |||||| || Sbjct 610 AGGCCCTTGTCCCTCTAA 593 >seq14057 Length=1105 Score = 179 bits (198), Expect = 6e-43 Identities = 200/258 (78%), Gaps = 8/258 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||| ||||||| |||||||||| |||||| |||||| | Sbjct 714 GTACAAAGGGCAGGGACGTAATCAATGCGAGCT-GATGACTCGCACTTACTGGGAATT-C 657 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||||| | || |||| ||| | ||||| | ||||| | | ||||| | || Sbjct 656 CTCGTTGACGGGGAAGAATTTCAAGCCCCGATCCCAAGCACGAGGGAGGTTCAACGGGTT 597 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||| ||| ||| | | || | |||| | ||||||||||||||||||| Sbjct 596 ACCCAACCCTAACGGGTCAGGACAAACACACATTGATCCCCTCAGTGTAGCGCGCGTGCG 537 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT-GGCCTAAA 238 |||| | |||||||||||||||||||||||||||||| |||| || ||| ||||| | Sbjct 536 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCATTCT--CGTGGGCCTTAG 480 Query 239 AGG-CCATCTCCCTCGAA 255 ||| || | |||||| || Sbjct 479 AGGCCCTTGTCCCTCTAA 462 >seq11776 Length=1210 Score = 179 bits (198), Expect = 6e-43 Identities = 200/258 (78%), Gaps = 8/258 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||| ||||||| |||||||||| |||||| |||||| | Sbjct 453 GTACAAAGGGCAGGGACGTAATCAATGCGAGCT-GATGACTCGCACTTACTGGGAATT-C 510 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||||| | || |||| ||| | ||||| | ||||| | | ||||| | || Sbjct 511 CTCGTTGACGGGGAAGAATTTCAAGCCCCGATCCCAAGCACGAGGGAGGTTCAACGGGTT 570 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||| ||| ||| | | || | |||| | ||||||||||||||||||| Sbjct 571 ACCCAACCCTAACGGGTCAGGACAAACACACATTGATCCCCTCAGTGTAGCGCGCGTGCG 630 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT-GGCCTAAA 238 |||| | |||||||||||||||||||||||||||||| |||| || ||| ||||| | Sbjct 631 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCATTCT--CGTGGGCCTTAG 687 Query 239 AGG-CCATCTCCCTCGAA 255 ||| || | |||||| || Sbjct 688 AGGCCCTTGTCCCTCTAA 705 >seq12002 Length=1200 Score = 176 bits (194), Expect = 7e-42 Identities = 199/258 (77%), Gaps = 8/258 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||| ||||||| |||||||||| |||||| |||||| | Sbjct 604 GTACAAAGGGCAGGGACGTAATCAATGCGAGCT-GATGACTCGCACTTACTGGGAATT-C 661 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||||| | || |||| ||| | ||||| | ||||| | | ||||| | || Sbjct 662 CTCGTTGACGGGGAAGAATTTCAAGCCCCGATCCCAAGCACGAGGGAGGTTCAACGGGTT 721 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||| ||| ||| | | || | |||| | ||||||||||||||||||| Sbjct 722 ACCCAACCCTAACGGGTCAGGACAAACACACATTGATCCCCTCAGTGTAGCGCGCGTGCG 781 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGT-GGCCTAAA 238 | || | |||||||||||||||||||||||||||||| |||| || ||| ||||| | Sbjct 782 GNCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCATTCT--CGTGGGCCTTAG 838 Query 239 AGG-CCATCTCCCTCGAA 255 ||| || | |||||| || Sbjct 839 AGGCCCTTGTCCCTCTAA 856 >seq16590 Length=1001 Score = 98.7 bits (108), Expect = 1e-18 Identities = 83/97 (86%), Gaps = 5/97 (5%) Strand=Plus/Minus Query 161 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 220 ||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||| Sbjct 162 TCAGTGTAGCGCGCGTGCGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTC 104 Query 221 AAACTTCCGT-GGCCTAAAAGG-CCATCTCCCTCGAA 255 | || ||| ||||| | ||| || | |||||| || Sbjct 103 ATTCT--CGTGGGCCTTAGAGGCCCTTGTCCCTCTAA 69 >seq10132 Length=1301 Score = 93.3 bits (102), Expect = 6e-17 Identities = 84/103 (82%), Gaps = 2/103 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||| |||||| ||||||||||| |||||| |||| ||| Sbjct 1194 GTACAAAGGGCAGGGACGTAATCAATGCGAGC-TGATGACTCGCACTTACTGGGAA-TTC 1251 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGA 103 |||||||| | || |||| ||| | ||||| | ||||| Sbjct 1252 CTCGTTGACGGGGAAGAATTTCAAGCCCCGATCCCAAGCACGA 1294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751848450145