Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq2706 298 9e-79 seq15481 244 2e-62 seq14057 244 2e-62 seq12002 241 2e-61 seq11776 241 2e-61 seq12450 170 3e-40 seq9325 170 3e-40 seq16590 113 7e-23 seq2072 111 3e-22 seq16309 107 3e-21 >seq2706 Length=2700 Score = 298 bits (330), Expect = 9e-79 Identities = 223/259 (86%), Gaps = 2/259 (1%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2335 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 2276 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||| | || ||| | ||||||||||||||||| ||| Sbjct 2275 CCTGTTATTGCCTCAAACTTCCGCGGCCTAAAAGGCCGTAGTCCCTCTAAGAAGCTGGCC 2216 Query 122 ACCAACC-ATAG-TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 || || ||| || |||| |||||||| | ||||||||||||||| ||||||| Sbjct 2215 ACGAAGGGATACCTCCGCATAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATT 2156 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || Sbjct 2155 AACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCTAG 2096 Query 240 AAAGAGCTATCAATCTGTC 258 |||||||| ||| |||||| Sbjct 2095 AAAGAGCTCTCAGTCTGTC 2077 >seq15481 Length=1046 Score = 244 bits (270), Expect = 2e-62 Identities = 210/254 (83%), Gaps = 12/254 (5%) Strand=Plus/Minus Query 13 CCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 72 || ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct 689 CCCTCAGTGTAGCGCGCGTGCGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC 630 Query 73 CTCAAACTTCCATTGGC--TGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACC-- 128 ||| || | | ||| | || ||| | |||||||||||||| | | | ||| Sbjct 629 -TCATTCT--CGTGGGCCTTAGAGGCCCTT-GTCCCTCTAAGAAGTAACCGCTCGACCGG 574 Query 129 -ATAGTCGATGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCA 184 | | |||| || |||||||||||| || ||||||||||||||| ||||| |||| Sbjct 573 CAGAACCGATCGGCGCACTATTTAGCAGGCTAGAGTCTCGTTCGTTATCAGAATTGACCA 514 Query 185 GACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGA 244 ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct 513 GACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCAACCACCGAATCAAGAAAGA 454 Query 245 GCTATCAATCTGTC 258 ||| |||||||||| Sbjct 453 GCTCTCAATCTGTC 440 >seq14057 Length=1105 Score = 244 bits (270), Expect = 2e-62 Identities = 210/254 (83%), Gaps = 12/254 (5%) Strand=Plus/Minus Query 13 CCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 72 || ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct 558 CCCTCAGTGTAGCGCGCGTGCGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC 499 Query 73 CTCAAACTTCCATTGGC--TGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACC-- 128 ||| || | | ||| | || ||| | |||||||||||||| | | | ||| Sbjct 498 -TCATTCT--CGTGGGCCTTAGAGGCCCTT-GTCCCTCTAAGAAGTAACCGCTCGACCGG 443 Query 129 -ATAGTCGATGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCA 184 | | |||| || |||||||||||| || ||||||||||||||| ||||| |||| Sbjct 442 CAGAACCGATCGGCGCACTATTTAGCAGGCTAGAGTCTCGTTCGTTATCAGAATTGACCA 383 Query 185 GACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGA 244 ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct 382 GACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCAACCACCGAATCAAGAAAGA 323 Query 245 GCTATCAATCTGTC 258 ||| |||||||||| Sbjct 322 GCTCTCAATCTGTC 309 >seq12002 Length=1200 Score = 241 bits (266), Expect = 2e-61 Identities = 209/254 (82%), Gaps = 12/254 (5%) Strand=Plus/Plus Query 13 CCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 72 || |||||||||||||||||||| || | ||||||||||||||||||||||||||||||| Sbjct 760 CCCTCAGTGTAGCGCGCGTGCGGNCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC 819 Query 73 CTCAAACTTCCATTGGC--TGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACC-- 128 ||| || | | ||| | || ||| | |||||||||||||| | | | ||| Sbjct 820 -TCATTCT--CGTGGGCCTTAGAGGCCCTT-GTCCCTCTAAGAAGTAACCGCTCGACCGG 875 Query 129 -ATAGTCGATGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCA 184 | | |||| || |||||||||||| || ||||||||||||||| ||||| |||| Sbjct 876 CAGAACCGATCGGCGCACTATTTAGCAGGCTAGAGTCTCGTTCGTTATCAGAATTGACCA 935 Query 185 GACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGA 244 ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct 936 GACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCAACCACCGAATCAAGAAAGA 995 Query 245 GCTATCAATCTGTC 258 ||| |||||||||| Sbjct 996 GCTCTCAATCTGTC 1009 >seq11776 Length=1210 Score = 241 bits (266), Expect = 2e-61 Identities = 209/254 (82%), Gaps = 12/254 (5%) Strand=Plus/Plus Query 13 CCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 72 || ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct 609 CCCTCAGTGTAGCGCGCGTGCGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC 668 Query 73 CTCAAACTTCCATTGGC--TGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACC-- 128 ||| || | | ||| | || ||| | |||||||||||||| | | | ||| Sbjct 669 -TCATTCT--CGTGGGCCTTAGAGGCCCTT-GTCCCTCTAAGAAGTAACCGCTCGACCGG 724 Query 129 -ATAGTCGATGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCA 184 | | |||| || |||||||||||| || ||||||||||||||| ||||| |||| Sbjct 725 CAGAACCGATCGGCGCACTATTTAGCAGGCTAGAGTCTCGTTCGTTATCAGAATTGACCA 784 Query 185 GACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGA 244 |||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||| Sbjct 785 GACAAATCACTCCACCAACTAAGAACGGCCATGCACCANCAACCACCGAATCAAGAAAGA 844 Query 245 GCTATCAATCTGTC 258 ||| |||||||||| Sbjct 845 GCTCTCAATCTGTC 858 >seq12450 Length=1176 Score = 170 bits (188), Expect = 3e-40 Identities = 108/117 (92%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 |||||||||||| || ||||||||||||||| ||||| ||||||||||||||||||||| Sbjct 8 CTATTTAGCAGGCTAGAGTCTCGTTCGTTATCAGAATTGACCAGACAAATCACTCCACCA 67 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||| ||| |||||||||||||||| |||||||||| Sbjct 68 ACTAAGAACGGCCATGCACCACCAACCACCGAATCAAGAAAGAGCTCTCAATCTGTC 124 >seq9325 Length=1356 Score = 170 bits (188), Expect = 3e-40 Identities = 108/117 (92%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 |||||||||||| || ||||||||||||||| ||||| ||||||||||||||||||||| Sbjct 61 CTATTTAGCAGGCTAGAGTCTCGTTCGTTATCAGAATTGACCAGACAAATCACTCCACCA 120 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||| ||| |||||||||||||||| |||||||||| Sbjct 121 ACTAAGAACGGCCATGCACCACCAACCACCGAATCAAGAAAGAGCTCTCAATCTGTC 177 >seq16590 Length=1001 Score = 113 bits (124), Expect = 7e-23 Identities = 128/166 (77%), Gaps = 12/166 (7%) Strand=Plus/Minus Query 13 CCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 72 || ||||||||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct 165 CCCTCAGTGTAGCGCGCGTGCGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG- 107 Query 73 CTCAAACTTCCATTGGC--TGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAAC--- 127 |||| || | | ||| | || ||| | |||||||||||||| | | | || Sbjct 106 CTCATTCT--CGTGGGCCTTAGAGGCC-CTTGTCCCTCTAAGAAGTAACCGCTCGACCGG 50 Query 128 CATAGTCGATGGG---GCTATTTAGCAGGTTAAGGTCTCGTTCGTT 170 || | |||| || |||||||||||| || |||||||||||| Sbjct 49 CAGAACCGATCGGCGCACTATTTAGCAGGCTAGAGTCTCGTTCGTT 4 >seq2072 Length=3235 Score = 111 bits (122), Expect = 3e-22 Identities = 127/165 (77%), Gaps = 12/165 (7%) Strand=Plus/Minus Query 13 CCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 72 || ||||||||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct 2447 CCCTCAGTGTAGCGCGCGTGCGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG- 2389 Query 73 CTCAAACTTCCATTGGC--TGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAAC--- 127 |||| || | | ||| | || ||| | |||||||||||||| | | | || Sbjct 2388 CTCATTCT--CGTGGGCCTTAGAGGCC-CTTGTCCCTCTAAGAAGTAACCGCTCGACCGG 2332 Query 128 CATAGTCGATGGG---GCTATTTAGCAGGTTAAGGTCTCGTTCGT 169 || | |||| || |||||||||||| || ||||||||||| Sbjct 2331 CAGAACCGATCGGCGCACTATTTAGCAGGCTAGAGTCTCGTTCGT 2287 >seq16309 Length=1013 Score = 107 bits (118), Expect = 3e-21 Identities = 134/177 (76%), Gaps = 15/177 (8%) Strand=Plus/Minus Query 13 CCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 72 || ||||||||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct 604 CCCTCAGTGTAGCGCGCGTGCGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG- 546 Query 73 CTCAAACTTCCATTGGC--TGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAAC--- 127 |||| || | | ||| | || ||| | |||||||||||||| | | | || Sbjct 545 CTCATTCT--CGTGGGCCTTAGAGGCC-CTTGTCCCTCTAAGAAGTAACCGCTCGACCGG 489 Query 128 CATAGTCGATGGG---GCTATTTAGCAGGTTAAGGTCTCGTTC---GTTATCGGAAT 178 || | |||| || |||||||||||| || ||||||||| ||||| |||| Sbjct 488 CAGAACCGATCGGCGCACTATTTAGCAGGCTAGAGTCTCGTTCAGAATTATCAGAAT 432 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796639421643