Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq17498 159 4e-37 seq2706 75.2 1e-11 >seq17498 Length=7131 Score = 159 bits (176), Expect = 4e-37 Identities = 152/192 (79%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct 5954 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTAATGTATTCG 6013 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || || |||||| | || |||||||||||| ||| |||||||||||| |||| | || Sbjct 6014 AGCATAGGCCTGCCTGGAGCACTCTAATTTTTTCACAGTAAAAGTCCTGTTTCCCCGCCA 6073 Query 126 CA-CCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTACTCGCC 183 || ||| |||| ||||| || ||| || | ||| | || |||||| ||| Sbjct 6074 CACCCAGTGAAGGGCATGGGGTTCCACAGAGGGAAAGGCCCGGCCGGACCAGTACACGCG 6133 Query 184 GTGAGGCGGACC 195 |||||||||||| Sbjct 6134 GTGAGGCGGACC 6145 >seq2706 Length=2700 Score = 75.2 bits (82), Expect = 1e-11 Identities = 77/98 (79%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 ||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 1682 CCAACGTAATAGGACCGAAA-TCCTATAATGTTATCCCATGCTAATGTATCCAGAGCGTA 1624 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 1623 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 1586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595080049902