Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq17498 264 1e-68 seq2706 127 2e-27 >seq17498 Length=7131 Score = 264 bits (292), Expect = 1e-68 Identities = 174/191 (91%), Gaps = 1/191 (1%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 |||| ||||||||||||| |||||||||||||| | || | |||||||| |||||||||| Sbjct 6067 GGAAACAGGACTTTTACTGTGAAAAAATTAGAGTGCTCCAGGCAGGCCTATGCTCGAATA 6008 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct 6007 CATTAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCG- 5949 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||||| |||| ||| ||||||||| ||||||||||||||||| ||||||||||| Sbjct 5948 CCGTAATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTC 5889 Query 181 TTGGATTTATT 191 ||||||||||| Sbjct 5888 TTGGATTTATT 5878 >seq2706 Length=2700 Score = 127 bits (140), Expect = 2e-27 Identities = 139/181 (77%), Gaps = 3/181 (2%) Strand=Plus/Plus Query 11 CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCAT 69 || |||||||||| ||||||||| | |||||||| |||| |||| | |||||||| ||| Sbjct 1586 CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGGATACATTAGCAT 1645 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 || |||| | |||||| | |||| ||||| || || | ||| || ||||||| Sbjct 1646 GGGATAACATTATAGGATTT-CGGTCCTATTACGTTGGCCTTCGGGATCGGA-GTAATGA 1703 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189 | || | ||| ||||||||| | ||||| || |||| |||||||||||||||||||| Sbjct 1704 TTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTA 1763 Query 190 T 190 | Sbjct 1764 T 1764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511896817120