Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq2706 316 4e-84 seq16309 199 7e-49 seq15481 199 7e-49 seq14057 199 7e-49 seq11776 199 7e-49 seq2072 199 7e-49 seq12002 196 9e-48 seq10132 109 1e-21 seq16590 107 4e-21 >seq2706 Length=2700 Score = 316 bits (350), Expect = 4e-84 Identities = 263/314 (84%), Gaps = 8/314 (3%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCC-GCTTTGGCGG-GTCGCCGGCTTCTT 77 || |||||||| | |||||||| |||| | || | | | | || ||| ||||||| Sbjct 2168 GAACGAGACCTCAGCCTGCTAACTAGCTATGCGGAGGTATCCCTTCGTGGCCAGCTTCTT 2227 Query 78 AGAGGGACTATCGGC---TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGC 134 |||||||||| |||| | | |||| |||||||||||||||||||||||||||||||| Sbjct 2228 AGAGGGACTA-CGGCCTTTTAGGCCGC-GGAAGTTTGAGGCAATAACAGGTCTGTGATGC 2285 Query 135 CCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTT 194 |||||||||||||||||||||||||||||||||||| | ||||||||| || |||| Sbjct 2286 CCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGTTTATAGCCTT 2345 Query 195 GGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAAT 254 ||||| ||||| |||||||||| | ||| | ||||| |||||||||| ||||||||| Sbjct 2346 GGCCGACAGGTCCGGGTAATCTT-TGAAATTTCATCGTGATGGGGATAGATCATTGCAAT 2404 Query 255 TATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGT 314 | ||| ||||||||||||||| ||||||||||||| ||||||||| |||||||| ||||| Sbjct 2405 TGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTACGT 2464 Query 315 CCCTGCCCTTTGTA 328 |||||||||||||| Sbjct 2465 CCCTGCCCTTTGTA 2478 >seq16309 Length=1013 Score = 199 bits (220), Expect = 7e-49 Identities = 238/317 (75%), Gaps = 11/317 (3%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCC--CGCTTTGGCGGGTCGC-CGG---CT 73 || |||||| || |||||||||||| | | || || || ||||| ||| || Sbjct 446 GAACGAGACTCTAGCCTGCTAAATAGTGCGCCGATCGGTTCTGCCGGTCGAGCGGTTACT 505 Query 74 TCTTAGAGGGACTATCGGCTCAA--GCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 |||||||||||| | | ||| | ||| | | || |||| ||||||||||||||||| Sbjct 506 TCTTAGAGGGACAAGGGCCTCTAAGGCCCACG--AGAATGAG-CAATAACAGGTCTGTGA 562 Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191 ||||||||||||| | ||||||||||||||||||||||| | ||| | || | | Sbjct 563 TGCCCTTAGATGTCCGGGGCCGCACGCGCGCTACACTGAGGGGATCAATGTGTGTTTGTC 622 Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251 || ||| ||| ||||||| | | || ||| ||||||| ||||| | | ||| Sbjct 623 CTGACCCGTTAGGGTTGGGTAACCCGTTGAACCTCCCTCGTGCTTGGGATCGGGGCTTGA 682 Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311 |||| || | | |||||||||||| || |||||| ||| ||||||||| ||| ||||||| Sbjct 683 AATTCTTCCCCGTCAACGAGGAATTCCCAGTAAGTGCGAGTCATCAGCTCGCATTGATTA 742 Query 312 CGTCCCTGCCCTTTGTA 328 ||||||||||||||||| Sbjct 743 CGTCCCTGCCCTTTGTA 759 >seq15481 Length=1046 Score = 199 bits (220), Expect = 7e-49 Identities = 238/317 (75%), Gaps = 11/317 (3%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCC--CGCTTTGGCGGGTCGC-CGG---CT 73 || |||||| || |||||||||||| | | || || || ||||| ||| || Sbjct 531 GAACGAGACTCTAGCCTGCTAAATAGTGCGCCGATCGGTTCTGCCGGTCGAGCGGTTACT 590 Query 74 TCTTAGAGGGACTATCGGCTCAA--GCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 |||||||||||| | | ||| | ||| | | || |||| ||||||||||||||||| Sbjct 591 TCTTAGAGGGACAAGGGCCTCTAAGGCCCACG--AGAATGAG-CAATAACAGGTCTGTGA 647 Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191 ||||||||||||| | ||||||||||||||||||||||| | ||| | || | | Sbjct 648 TGCCCTTAGATGTCCGGGGCCGCACGCGCGCTACACTGAGGGGATCAATGTGTGTTTGTC 707 Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251 || ||| ||| ||||||| | | || ||| ||||||| ||||| | | ||| Sbjct 708 CTGACCCGTTAGGGTTGGGTAACCCGTTGAACCTCCCTCGTGCTTGGGATCGGGGCTTGA 767 Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311 |||| || | | |||||||||||| || |||||| ||| ||||||||| ||| ||||||| Sbjct 768 AATTCTTCCCCGTCAACGAGGAATTCCCAGTAAGTGCGAGTCATCAGCTCGCATTGATTA 827 Query 312 CGTCCCTGCCCTTTGTA 328 ||||||||||||||||| Sbjct 828 CGTCCCTGCCCTTTGTA 844 >seq14057 Length=1105 Score = 199 bits (220), Expect = 7e-49 Identities = 238/317 (75%), Gaps = 11/317 (3%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCC--CGCTTTGGCGGGTCGC-CGG---CT 73 || |||||| || |||||||||||| | | || || || ||||| ||| || Sbjct 400 GAACGAGACTCTAGCCTGCTAAATAGTGCGCCGATCGGTTCTGCCGGTCGAGCGGTTACT 459 Query 74 TCTTAGAGGGACTATCGGCTCAA--GCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 |||||||||||| | | ||| | ||| | | || |||| ||||||||||||||||| Sbjct 460 TCTTAGAGGGACAAGGGCCTCTAAGGCCCACG--AGAATGAG-CAATAACAGGTCTGTGA 516 Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191 ||||||||||||| | ||||||||||||||||||||||| | ||| | || | | Sbjct 517 TGCCCTTAGATGTCCGGGGCCGCACGCGCGCTACACTGAGGGGATCAATGTGTGTTTGTC 576 Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251 || ||| ||| ||||||| | | || ||| ||||||| ||||| | | ||| Sbjct 577 CTGACCCGTTAGGGTTGGGTAACCCGTTGAACCTCCCTCGTGCTTGGGATCGGGGCTTGA 636 Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311 |||| || | | |||||||||||| || |||||| ||| ||||||||| ||| ||||||| Sbjct 637 AATTCTTCCCCGTCAACGAGGAATTCCCAGTAAGTGCGAGTCATCAGCTCGCATTGATTA 696 Query 312 CGTCCCTGCCCTTTGTA 328 ||||||||||||||||| Sbjct 697 CGTCCCTGCCCTTTGTA 713 >seq11776 Length=1210 Score = 199 bits (220), Expect = 7e-49 Identities = 238/317 (75%), Gaps = 11/317 (3%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCC--CGCTTTGGCGGGTCGC-CGG---CT 73 || |||||| || |||||||||||| | | || || || ||||| ||| || Sbjct 767 GAACGAGACTCTAGCCTGCTAAATAGTGCGCCGATCGGTTCTGCCGGTCGAGCGGTTACT 708 Query 74 TCTTAGAGGGACTATCGGCTCAA--GCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 |||||||||||| | | ||| | ||| | | || |||| ||||||||||||||||| Sbjct 707 TCTTAGAGGGACAAGGGCCTCTAAGGCCCACG--AGAATGAG-CAATAACAGGTCTGTGA 651 Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191 ||||||||||||| | ||||||||||||||||||||||| | ||| | || | | Sbjct 650 TGCCCTTAGATGTCCGGGGCCGCACGCGCGCTACACTGAGGGGATCAATGTGTGTTTGTC 591 Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251 || ||| ||| ||||||| | | || ||| ||||||| ||||| | | ||| Sbjct 590 CTGACCCGTTAGGGTTGGGTAACCCGTTGAACCTCCCTCGTGCTTGGGATCGGGGCTTGA 531 Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311 |||| || | | |||||||||||| || |||||| ||| ||||||||| ||| ||||||| Sbjct 530 AATTCTTCCCCGTCAACGAGGAATTCCCAGTAAGTGCGAGTCATCAGCTCGCATTGATTA 471 Query 312 CGTCCCTGCCCTTTGTA 328 ||||||||||||||||| Sbjct 470 CGTCCCTGCCCTTTGTA 454 >seq2072 Length=3235 Score = 199 bits (220), Expect = 7e-49 Identities = 238/317 (75%), Gaps = 11/317 (3%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCC--CGCTTTGGCGGGTCGC-CGG---CT 73 || |||||| || |||||||||||| | | || || || ||||| ||| || Sbjct 2289 GAACGAGACTCTAGCCTGCTAAATAGTGCGCCGATCGGTTCTGCCGGTCGAGCGGTTACT 2348 Query 74 TCTTAGAGGGACTATCGGCTCAA--GCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 |||||||||||| | | ||| | ||| | | || |||| ||||||||||||||||| Sbjct 2349 TCTTAGAGGGACAAGGGCCTCTAAGGCCCACG--AGAATGAG-CAATAACAGGTCTGTGA 2405 Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191 ||||||||||||| | ||||||||||||||||||||||| | ||| | || | | Sbjct 2406 TGCCCTTAGATGTCCGGGGCCGCACGCGCGCTACACTGAGGGGATCAATGTGTGTTTGTC 2465 Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251 || ||| ||| ||||||| | | || ||| ||||||| ||||| | | ||| Sbjct 2466 CTGACCCGTTAGGNTTGGGTAACCCGTTGAACCTCCCTCGTGCTTGGGATCGGGGCTTGA 2525 Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311 |||| || | | |||||||||||| || |||||| ||| ||||||||| ||| ||||||| Sbjct 2526 AATTCTTCCCCGTCAACGAGGAATTCCCAGTAAGTGCGAGTCATCAGCTCGCATTGATTA 2585 Query 312 CGTCCCTGCCCTTTGTA 328 ||||||||||||||||| Sbjct 2586 CGTCCCTGCCCTTTGTA 2602 >seq12002 Length=1200 Score = 196 bits (216), Expect = 9e-48 Identities = 237/317 (75%), Gaps = 11/317 (3%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCC--CGCTTTGGCGGGTCGC-CGG---CT 73 || |||||| || |||||||||||| | | || || || ||||| ||| || Sbjct 918 GAACGAGACTCTAGCCTGCTAAATAGTGCGCCGATCGGTTCTGCCGGTCGAGCGGTTACT 859 Query 74 TCTTAGAGGGACTATCGGCTCAA--GCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 |||||||||||| | | ||| | ||| | | || |||| ||||||||||||||||| Sbjct 858 TCTTAGAGGGACAAGGGCCTCTAAGGCCCACG--AGAATGAG-CAATAACAGGTCTGTGA 802 Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191 ||||||||||||| | || |||||||||||||||||||| | ||| | || | | Sbjct 801 TGCCCTTAGATGTCCGGGNCCGCACGCGCGCTACACTGAGGGGATCAATGTGTGTTTGTC 742 Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251 || ||| ||| ||||||| | | || ||| ||||||| ||||| | | ||| Sbjct 741 CTGACCCGTTAGGGTTGGGTAACCCGTTGAACCTCCCTCGTGCTTGGGATCGGGGCTTGA 682 Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311 |||| || | | |||||||||||| || |||||| ||| ||||||||| ||| ||||||| Sbjct 681 AATTCTTCCCCGTCAACGAGGAATTCCCAGTAAGTGCGAGTCATCAGCTCGCATTGATTA 622 Query 312 CGTCCCTGCCCTTTGTA 328 ||||||||||||||||| Sbjct 621 CGTCCCTGCCCTTTGTA 605 >seq10132 Length=1301 Score = 109 bits (120), Expect = 1e-21 Identities = 84/100 (84%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 229 TCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGC 288 ||||||| ||||| | | ||| |||| || | | |||||||||||| || |||||| || Sbjct 1294 TCGTGCTTGGGATCGGGGCTTGAAATTCTTCCCCGTCAACGAGGAATTCCCAGTAAGTGC 1235 Query 289 GTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | ||||||||| ||| |||||||||||||||||||||||| Sbjct 1234 GAGTCATCAGCTCGCATTGATTACGTCCCTGCCCTTTGTA 1195 >seq16590 Length=1001 Score = 107 bits (118), Expect = 4e-21 Identities = 123/159 (77%), Gaps = 11/159 (7%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCC--CGCTTTGGCGGGTCGC-CGG---CT 73 || |||||| || |||||||||||| | | || || || ||||| ||| || Sbjct 7 GAACGAGACTCTAGCCTGCTAAATAGTGCGCCGATCGGTTCTGCCGGTCGAGCGGTTACT 66 Query 74 TCTTAGAGGGACTATCGGCTCAA--GCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 |||||||||||| | | ||| | ||| | | || |||| ||||||||||||||||| Sbjct 67 TCTTAGAGGGACAAGGGCCTCTAAGGCCCACG--AGAATGAG-CAATAACAGGTCTGTGA 123 Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGA 170 ||||||||||||| | ||||||||||||||||||||||| Sbjct 124 TGCCCTTAGATGTCCGGGGCCGCACGCGCGCTACACTGA 162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947002953984