Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conus_20tribblei_20[genbank_20GCA_5F001262575.1_202015-08-04] 1,126,156 sequences; 2,160,493,082 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq270868 150 3e-34 seq65005 114 2e-23 seq275566 105 1e-20 seq88500 102 1e-19 seq733747 93.3 7e-17 seq471071 77.0 5e-12 >seq270868 Length=10865 Score = 150 bits (166), Expect = 3e-34 Identities = 107/123 (87%), Gaps = 6/123 (5%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||||| || ||| || ||||||||||||||||||||| |||||||||||| |||||||| Sbjct 6368 CTATTCAGTAGGCTAGAGTCTCGTTCGTTATCGGAATTTACCAGACAAATCGCTCCACCA 6427 Query 202 ACTAAGAACGGCCATGCACCA------CCACCCATAGAATCAAGAAAGAGCTATCAATCT 255 ||||||||||||||||||||| ||||||| ||||| |||||||||||||||||| Sbjct 6428 ACTAAGAACGGCCATGCACCACCGGCCCCACCCACTGAATCGAGAAAGAGCTATCAATCT 6487 Query 256 GTC 258 ||| Sbjct 6488 GTC 6490 >seq65005 Length=6948 Score = 114 bits (126), Expect = 2e-23 Identities = 72/78 (92%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 |||||||||||| |||||||||||| ||||||||||||||||||||||| ||| ||||| Sbjct 3706 ACCAGACAAATCGCTCCACCAACTACGAACGGCCATGCACCACCACCCACCGAAACAAGA 3647 Query 241 AAGAGCTATCAATCTGTC 258 ||||| |||||||||||| Sbjct 3646 AAGAGATATCAATCTGTC 3629 >seq275566 Length=3592 Score = 105 bits (116), Expect = 1e-20 Identities = 80/93 (86%), Gaps = 1/93 (1%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||||||| |||||| |||||||| | || ||||| |||||||||||| ||| || ||||| Sbjct 1784 GTCTCGTCCGTTATGGGAATTAATCTGATAAATCGCTCCACCAACTAGGAA-GGTCATGC 1842 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCA 251 | || ||||||| |||||| ||||||||||||| Sbjct 1843 ATCATCACCCATCGAATCAGGAAAGAGCTATCA 1875 >seq88500 Length=3264 Score = 102 bits (112), Expect = 1e-19 Identities = 75/86 (87%), Gaps = 1/86 (1%) Strand=Plus/Plus Query 174 GGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGA 233 || ||| |||||||||||| |||||||||| ||||||| ||||||||||||||||| || Sbjct 2247 GGGATTCACCAGACAAATCGCTCCACCAACGAAGAACGACCATGCACCACCACCCACCGA 2306 Query 234 ATCAAGAAAGAGCTA-TCAATCTGTC 258 || ||||||||||| | |||||||| Sbjct 2307 ATGTAGAAAGAGCTATTAAATCTGTC 2332 >seq733747 Length=2535 Score = 93.3 bits (102), Expect = 7e-17 Identities = 73/86 (85%), Gaps = 1/86 (1%) Strand=Plus/Plus Query 174 GGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGA 233 || ||| ||||||||| || ||||||||| ||||||||||||| ||||||||||| || Sbjct 2446 GGGATTCACCAGACAAGTCGTTCCACCAACGAAGAACGGCCATGTACCACCACCCACCGA 2505 Query 234 ATCAAGAAAGAGCTA-TCAATCTGTC 258 || ||||||||||| | |||||||| Sbjct 2506 ATGTAGAAAGAGCTATTAAATCTGTC 2531 >seq471071 Length=2450 Score = 77.0 bits (84), Expect = 5e-12 Identities = 44/45 (98%), Gaps = 0/45 (0%) Strand=Plus/Plus Query 184 AGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCC 228 ||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 145 AGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCC 189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 788107201836