Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Corbicula_20fluminea_20[genbank_20GCA_5F001632725.1_202016-04-26] 778 sequences; 662,517 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq1 190 3e-46 >seq1 Length=7763 Score = 190 bits (210), Expect = 3e-46 Identities = 188/235 (80%), Gaps = 6/235 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||| | Sbjct 5158 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACTCGCGCTTACTGGGAATT-C 5215 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | ||||||||||| | ||||| ||||||| ||||| | || Sbjct 5216 CTCGTTCATGGGGAACAATTGCAAGCCCCAATCCCTATCACGAATGGGGTTCAACGGGTT 5275 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACAT-CAGTGTAGCGCGCGTGC 178 ||| | ||| |||| | ||| || | | || ||| | ||| ||||||||||| |||| Sbjct 5276 TCCCAGCCCTTTCGGGCCAGGCGAGACGCACGCTGA-TCCATTCAGTGTAGCGCATGTGC 5334 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 ||||| |||||||||||||||||||||||||||||||| ||||| || ||||| Sbjct 5335 GGCCCCGAACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGTGTGGC 5388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751994332270