Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Corbicula_20fluminea_20[genbank_20GCA_5F001632725.1_202016-04-26] 778 sequences; 662,517 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq1 203 6e-50 >seq1 Length=7763 Score = 203 bits (224), Expect = 6e-50 Identities = 220/285 (77%), Gaps = 10/285 (4%) Strand=Plus/Minus Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99 ||| ||| |||| |||| |||| ||| | || ||||||||||| ||||||||||| || Sbjct 6086 TGCTCTTGACTGAGTGTCTCGGGCGGCCGGAACGTTTACTTTGAAGAAATTAGAGTGCTC 6027 Query 100 AAAGCAGGCCTTTGCTCGAATACATTA----GCATGGAATAATAGAATAGGACGTGCGGT 155 ||||||||||||||| || | || | |||||||||||| |||||||| | |||| Sbjct 6026 AAAGCAGGCCTTTGC-CGCCTGTATAATGGTGCATGGAATAATGGAATAGGATCT-CGGT 5969 Query 156 TCTATTTTGTTGGTTTCTAGGACCGCCG--TAATGATTAATAGGGATAGTCGGGGGTGTC 213 |||||||||||||||| | ||| | | |||||||||||||||| | |||||| | Sbjct 5968 TCTATTTTGTTGGTTT-TCGGAGCTCGAGATAATGATTAATAGGGACTGACGGGGGCATT 5910 Query 214 AGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGC 273 ||||| | |||||||||||||||||| ||||| |||||| |||||||| Sbjct 5909 CGTATTGCGGCGCTAGAGGTGAAATTCTTGGACCGTCGCAAGACGAACTACAGCGAAAGC 5850 Query 274 GTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 || ||||| |||||||||||||||| |||||||||| || || Sbjct 5849 ATTTGCCAAGCATGTTTTCATTAATCA-AGAACGAAAGTCAGAGG 5806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915192879744