Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Corbicula_20fluminea_20[genbank_20GCA_5F001632725.1_202016-04-26] 778 sequences; 662,517 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq1 199 7e-49 >seq1 Length=7763 Score = 199 bits (220), Expect = 7e-49 Identities = 236/314 (75%), Gaps = 8/314 (3%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGC----TTC 75 || |||||| || |||||||||||| || | || | | ||| ||| | ||| Sbjct 5469 GAACGAGACTCTAGCCTGCTAAATAGTTCGGGGATCCTTCG-GAGTCCCCGCCAAACTTC 5411 Query 76 TTAGAGGGACTATCGGCTCA-AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGC 134 |||||||||| | ||| | |||| || | ||||| |||||||||||||||||||| Sbjct 5410 TTAGAGGGACAAGTGGCGCTTAGCCACACGA-GATTGAG-CAATAACAGGTCTGTGATGC 5353 Query 135 CCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTT 194 |||||||||||| ||||||||| |||||||||||| | || || | || ||| Sbjct 5352 CCTTAGATGTTCGGGGCCGCACATGCGCTACACTGAATGGATCAGCGTGCGTCTCGCCTG 5293 Query 195 GGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAAT 254 | ||| |||| ||||| || | | || | | ||||| | ||||| | | ||||||| Sbjct 5292 GCCCGAAAGGGCTGGGAAACCCGTTGAACCCCATTCGTGATAGGGATTGGGGCTTGCAAT 5233 Query 255 TATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGT 314 | || | | | |||||||||| || |||||||||| ||||||||| |||||||||||||| Sbjct 5232 TGTTCCCCATGAACGAGGAATTCCCAGTAAGCGCGAGTCATCAGCTCGCGTTGATTACGT 5173 Query 315 CCCTGCCCTTTGTA 328 |||||||||||||| Sbjct 5172 CCCTGCCCTTTGTA 5159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947192630784