Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Corbicula_20fluminea_20[genbank_20GCA_5F001632725.1_202016-04-26] 778 sequences; 662,517 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq1 630 2e-178 >seq1 Length=7763 Score = 630 bits (698), Expect = 2e-178 Identities = 472/551 (86%), Gaps = 21/551 (4%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||||||||| ||| |||| || ||| |||| || ||||||||||||||||||| Sbjct 1006 CTTTTGCTCTACGCGAGGTTTCCGTCCTCGCTGAGCCCACCTTAGGACACCTGCGTTACC 1065 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||| |||||||| ||||||||| |||||||||| |||||||| ||| ||| ||| || Sbjct 1066 GTTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGACAAGGTCTTCAGAGCGGGTC 1125 Query 127 ---GGCCCGCGAAG-----GACC--TTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCC 176 ||||| | || | || ||| |||||||| ||| | | | || | ||| Sbjct 1126 ACGGGCCCCAGCAGAGGGGGCCCGCTTAGCGCCAGAACCTGGGGGCTTGCGCCCCGGTCC 1185 Query 177 --GCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCC----- 229 || ||| ||| |||||||| ||||||||| ||||||||||||||| |||| Sbjct 1186 CCGCCTCACTGAATAAGTAAAGAAACGATAAAAGTAGTGGTATTTCACGATCGCCTCCTC 1245 Query 230 ---GA-AACGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGA 285 || || ||||||||||||| |||||||||||| ||| ||||||||| | ||||||| Sbjct 1246 ACGGAGAAGGGCTCCCACTTATGCTACACCTCTCATGTCTCTTCACAAAGCCAGACTAGA 1305 Query 286 GTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGT 345 |||||||||||||||||||||||||||||||| | | |||||||||||||||||||||| Sbjct 1306 GTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGTTGCATCCAAGCCCGTTCCCTTGGCTGT 1365 Query 346 GGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCA 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1366 GGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCA 1425 Query 406 CTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTA 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1426 CTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTA 1485 Query 466 CCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTG 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1486 CCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTG 1545 Query 526 CGTCAACATCA 536 |||||||| || Sbjct 1546 CGTCAACACCA 1556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635187278144