Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Corbicula_20fluminea_20[genbank_20GCA_5F001632725.1_202016-04-26] 778 sequences; 662,517 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq1 461 2e-127 >seq1 Length=7763 Score = 461 bits (510), Expect = 2e-127 Identities = 418/516 (81%), Gaps = 13/516 (3%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||||||||||| | || | || ||| || |||| ||||| | ||||||||| Sbjct 6282 GTACTCATTCCAATTACGGGGCCTCGAATGAGTCCCGTATTGTTATTTTTCGTCACTACC 6341 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6342 TCCCCGTGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 6401 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct 6402 ATCTCATGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTATCACCATGGT 6461 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| | ||||||||| ||||||||||||||| ||||||| || | |||||| | Sbjct 6462 AGGCATAGCACGTACCATCGACAGTTGATAGGGCAGACATTTGAAAGATACGTCGCCGCC 6521 Query 240 TCAAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCAAG-GAGCC--CCG-AAGGG 293 | ||| |||||||| | ||||| || || |||||| | | ||| ||| ||| Sbjct 6522 GCTAGGGCATGCGATCGGCACAAAGTTGTTCAGAGTCACCAGGTGGGCCGGCCGCGAGGA 6581 Query 294 C--GTTGGTTTTTTATCTAATAAATACACCCCTTC--CGAAGTCGG-GGTTTTTAGCATG 348 | | | | |||| |||| ||| | | | | | ||| ||||| | | | | ||||| Sbjct 6582 CCGGATTGGTTTTGGGCTAACAAAAGCGCTCTTCCCGCGAGGTCGGAGCTGTGTTGCATG 6641 Query 349 TATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAA 408 |||||||||||||||| |||| |||||||| |||| | |||| ||| || ||| |||| Sbjct 6642 TATTAGCTCTAGAATTGCCACAGTTATCCAAGTAGGATTGTACGATCTAAGGAACCATAA 6701 Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATG 468 |||||||||||||||||||||||| || | || | || || | |||||||||||||||| Sbjct 6702 CTGATTTAATGAGCCATTCGCAGTCTCGCCGTCTTGA-GGCGTGTACTTAGACATGCATG 6760 Query 469 GCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||||||||| Sbjct 6761 GCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 6796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510388249088