Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crassostrea_20gigas_20[refseq_20GCF_5F000297895.1_202012-09-19] 7,659 sequences; 557,735,934 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq6303 93.3 2e-17 seq6211 93.3 2e-17 seq6052 93.3 2e-17 seq5374 93.3 2e-17 seq2554 93.3 2e-17 seq749 93.3 2e-17 seq446 93.3 2e-17 seq175 93.3 2e-17 seq4138 71.6 6e-11 >seq6303 Length=3216 Score = 93.3 bits (102), Expect = 2e-17 Identities = 62/69 (90%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| ||||||||| |||||||||||||||| ||||||||||| || Sbjct 880 GGAAAAGAAACTAACTAGGATTCCCCTAGTAACGGCGAGTGAAGCGGGAAGAGCCCTGCA 821 Query 61 CCGAATCCC 69 ||||||||| Sbjct 820 CCGAATCCC 812 >seq6211 Length=2874 Score = 93.3 bits (102), Expect = 2e-17 Identities = 62/69 (90%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| ||||||||| |||||||||||||||| ||||||||||| || Sbjct 911 GGAAAAGAAACTAACTAGGATTCCCCTAGTAACGGCGAGTGAAGCGGGAAGAGCCCTGCA 852 Query 61 CCGAATCCC 69 ||||||||| Sbjct 851 CCGAATCCC 843 >seq6052 Length=2439 Score = 93.3 bits (102), Expect = 2e-17 Identities = 62/69 (90%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| ||||||||| |||||||||||||||| ||||||||||| || Sbjct 1898 GGAAAAGAAACTAACTAGGATTCCCCTAGTAACGGCGAGTGAAGCGGGAAGAGCCCTGCA 1957 Query 61 CCGAATCCC 69 ||||||||| Sbjct 1958 CCGAATCCC 1966 >seq5374 Length=1120 Score = 93.3 bits (102), Expect = 2e-17 Identities = 62/69 (90%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| ||||||||| |||||||||||||||| ||||||||||| || Sbjct 164 GGAAAAGAAACTAACTAGGATTCCCCTAGTAACGGCGAGTGAAGCGGGAAGAGCCCTGCA 105 Query 61 CCGAATCCC 69 ||||||||| Sbjct 104 CCGAATCCC 96 >seq2554 Length=3356 Score = 93.3 bits (102), Expect = 2e-17 Identities = 62/69 (90%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| ||||||||| |||||||||||||||| ||||||||||| || Sbjct 1844 GGAAAAGAAACTAACTAGGATTCCCCTAGTAACGGCGAGTGAAGCGGGAAGAGCCCTGCA 1785 Query 61 CCGAATCCC 69 ||||||||| Sbjct 1784 CCGAATCCC 1776 >seq749 Length=517955 Score = 93.3 bits (102), Expect = 2e-17 Identities = 62/69 (90%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| ||||||||| |||||||||||||||| ||||||||||| || Sbjct 340215 GGAAAAGAAACTAACTAGGATTCCCCTAGTAACGGCGAGTGAAGCGGGAAGAGCCCTGCA 340156 Query 61 CCGAATCCC 69 ||||||||| Sbjct 340155 CCGAATCCC 340147 >seq446 Length=2878 Score = 93.3 bits (102), Expect = 2e-17 Identities = 62/69 (90%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| ||||||||| |||||||||||||||| ||||||||||| || Sbjct 136 GGAAAAGAAACTAACTAGGATTCCCCTAGTAACGGCGAGTGAAGCGGGAAGAGCCCTGCA 77 Query 61 CCGAATCCC 69 ||||||||| Sbjct 76 CCGAATCCC 68 >seq175 Length=6454 Score = 93.3 bits (102), Expect = 2e-17 Identities = 62/69 (90%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| ||||||||| |||||||||||||||| ||||||||||| || Sbjct 3440 GGAAAAGAAACTAACTAGGATTCCCCTAGTAACGGCGAGTGAAGCGGGAAGAGCCCTGCA 3381 Query 61 CCGAATCCC 69 ||||||||| Sbjct 3380 CCGAATCCC 3372 >seq4138 Length=278 Score = 71.6 bits (78), Expect = 6e-11 Identities = 50/57 (88%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCA 57 |||||||||||| || ||||||||| |||||||||||| |||| ||||| |||||| Sbjct 222 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAACAGCCCA 278 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230383456560