Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crassostrea_20gigas_20[refseq_20GCF_5F000297895.1_202012-09-19] 7,659 sequences; 557,735,934 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq5867 374 1e-101 seq5677 374 1e-101 seq5467 374 1e-101 seq5377 374 1e-101 seq175 374 1e-101 seq5253 370 2e-100 seq2853 255 1e-65 seq5152 242 6e-62 seq1483 122 1e-25 seq3242 114 2e-23 seq334 109 9e-22 seq7638 104 4e-20 >seq5867 Length=1991 Score = 374 bits (414), Expect = 1e-101 Identities = 261/296 (88%), Gaps = 3/296 (1%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG---TCATCAGTAGGGTAAAACTAACCTGTC 57 |||| ||| | |||||| ||| |||| | ||||||||||||||||||||||||||| Sbjct 1365 TACTGAGCAGGATTACCGTTGCAACGACTGCAGTCATCAGTAGGGTAAAACTAACCTGTC 1424 Query 58 TCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTAC 117 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1425 TCACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAAGCCAACGCTTGG 1484 Query 118 CGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGC 177 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1485 TGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGC 1544 Query 178 TATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAG 237 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | Sbjct 1545 TATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTG 1604 Query 238 CCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | | ||| | | | | |||||||||||||||| | |||||| ||| ||||||| Sbjct 1605 CTTAAAACTCCTAAAATCAAAAGGATCGATAGGCCCCGCTTTCACGGTCTGTATTC 1660 >seq5677 Length=1681 Score = 374 bits (414), Expect = 1e-101 Identities = 261/296 (88%), Gaps = 3/296 (1%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG---TCATCAGTAGGGTAAAACTAACCTGTC 57 |||| ||| | |||||| ||| |||| | ||||||||||||||||||||||||||| Sbjct 1221 TACTGAGCAGGATTACCGTTGCAACGACTGCAGTCATCAGTAGGGTAAAACTAACCTGTC 1280 Query 58 TCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTAC 117 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1281 TCACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAAGCCAACGCTTGG 1340 Query 118 CGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGC 177 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1341 TGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGC 1400 Query 178 TATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAG 237 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | Sbjct 1401 TATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTG 1460 Query 238 CCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | | ||| | | | | |||||||||||||||| | |||||| ||| ||||||| Sbjct 1461 CTTAAAACTCCTAAAATCAAAAGGATCGATAGGCCCCGCTTTCACGGTCTGTATTC 1516 >seq5467 Length=1275 Score = 374 bits (414), Expect = 1e-101 Identities = 261/296 (88%), Gaps = 3/296 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG---TCATCAGTAGGGTAAAACTAACCTGTC 57 |||| ||| | |||||| ||| |||| | ||||||||||||||||||||||||||| Sbjct 539 TACTGAGCAGGATTACCGTTGCAACGACTGCAGTCATCAGTAGGGTAAAACTAACCTGTC 480 Query 58 TCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTAC 117 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 479 TCACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAAGCCAACGCTTGG 420 Query 118 CGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGC 177 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 419 TGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGC 360 Query 178 TATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAG 237 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | Sbjct 359 TATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTG 300 Query 238 CCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | | ||| | | | | |||||||||||||||| | |||||| ||| ||||||| Sbjct 299 CTTAAAACTCCTAAAATCAAAAGGATCGATAGGCCCCGCTTTCACGGTCTGTATTC 244 >seq5377 Length=1104 Score = 374 bits (414), Expect = 1e-101 Identities = 261/296 (88%), Gaps = 3/296 (1%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG---TCATCAGTAGGGTAAAACTAACCTGTC 57 |||| ||| | |||||| ||| |||| | ||||||||||||||||||||||||||| Sbjct 639 TACTGAGCAGGATTACCGTTGCAACGACTGCAGTCATCAGTAGGGTAAAACTAACCTGTC 698 Query 58 TCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTAC 117 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 699 TCACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAAGCCAACGCTTGG 758 Query 118 CGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGC 177 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 759 TGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGC 818 Query 178 TATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAG 237 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | Sbjct 819 TATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTG 878 Query 238 CCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | | ||| | | | | |||||||||||||||| | |||||| ||| ||||||| Sbjct 879 CTTAAAACTCCTAAAATCAAAAGGATCGATAGGCCCCGCTTTCACGGTCTGTATTC 934 >seq175 Length=6454 Score = 374 bits (414), Expect = 1e-101 Identities = 261/296 (88%), Gaps = 3/296 (1%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG---TCATCAGTAGGGTAAAACTAACCTGTC 57 |||| ||| | |||||| ||| |||| | ||||||||||||||||||||||||||| Sbjct 107 TACTGAGCAGGATTACCGTTGCAACGACTGCAGTCATCAGTAGGGTAAAACTAACCTGTC 166 Query 58 TCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTAC 117 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 167 TCACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAAGCCAACGCTTGG 226 Query 118 CGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGC 177 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 227 TGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGC 286 Query 178 TATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAG 237 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | Sbjct 287 TATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTG 346 Query 238 CCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | | ||| | | | | |||||||||||||||| | |||||| ||| ||||||| Sbjct 347 CTTAAAACTCCTAAAATCAAAAGGATCGATAGGCCCCGCTTTCACGGTCTGTATTC 402 >seq5253 Length=910 Score = 370 bits (410), Expect = 2e-100 Identities = 260/296 (88%), Gaps = 3/296 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG---TCATCAGTAGGGTAAAACTAACCTGTC 57 |||| ||| | |||||| ||| |||| | ||||||||||||||||||||||||||| Sbjct 771 TACTGAGCAGGATTACCGTTGCAACGACTGCAGTCATCAGTAGGGTAAAACTAACCTGTC 712 Query 58 TCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTAC 117 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 711 TCACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAAGCCAACGCTTGG 652 Query 118 CGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGC 177 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 651 TGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGC 592 Query 178 TATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAG 237 ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| | Sbjct 591 TATGACCGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTG 532 Query 238 CCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | | ||| | | | | |||||||||||||||| | |||||| ||| ||||||| Sbjct 531 CTTAAAACTCCTAAAATCAAAAGGATCGATAGGCCCCGCTTTCACGGTCTGTATTC 476 >seq2853 Length=43745 Score = 255 bits (282), Expect = 1e-65 Identities = 171/190 (90%), Gaps = 3/190 (2%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG---TCATCAGTAGGGTAAAACTAACCTGTC 57 |||| ||| | |||||| ||| |||| | ||||||||||||||||||||||||||| Sbjct 3646 TACTGAGCAGGATTACCGTTGCAACGACTGCAGTCATCAGTAGGGTAAAACTAACCTGTC 3705 Query 58 TCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTAC 117 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 3706 TCACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAAGCCAACGCTTGG 3765 Query 118 CGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGC 177 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 3766 TGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGC 3825 Query 178 TATGAACGCT 187 |||||||||| Sbjct 3826 TATGAACGCT 3835 >seq5152 Length=810 Score = 242 bits (268), Expect = 6e-62 Identities = 164/183 (90%), Gaps = 3/183 (2%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG---TCATCAGTAGGGTAAAACTAACCTGTC 57 |||| ||| | |||||| ||| |||| | ||||||||||||||||||||||||||| Sbjct 628 TACTGAGCAGGATTACCGTTGCAACGACTGCAGTCATCAGTAGGGTAAAACTAACCTGTC 687 Query 58 TCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTAC 117 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 688 TCACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAAGCCAACGCTTGG 747 Query 118 CGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGC 177 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 748 TGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGC 807 Query 178 TAT 180 ||| Sbjct 808 TAT 810 >seq1483 Length=718636 Score = 122 bits (134), Expect = 1e-25 Identities = 109/134 (81%), Gaps = 2/134 (1%) Strand=Plus/Minus Query 77 GCTCACGTTCCCTATTAG-TGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTAT 135 |||||| || |||| || | ||| ||||| ||| |||| |||||||||||| || Sbjct 95140 GCTCACTTTTCCTAATAAATTGGTCAACAAGCCAGCGCTCGGTGAATTCTGCTTCATAAT 95081 Query 136 GATAGGAAGAGCCGACA-TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGC 194 | || || ||||||||| ||||||||| |||||||||||||||||| |||| ||||||| Sbjct 95080 GGTAAGACGAGCCGACAATCGAAGGATAAAAAAGCAACGTCGCTATAAACGATTGGCTGT 95021 Query 195 CACAAGCCAGTTAT 208 ||||||||||||| Sbjct 95020 GACAAGCCAGTTAT 95007 >seq3242 Length=488303 Score = 114 bits (126), Expect = 2e-23 Identities = 107/135 (79%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 76 AGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTAT 135 || |||| |||| || ||| ||| ||||| ||| |||| |||||||||||| || Sbjct 350187 AGATCACTTTCCTAATAAGTTGGTCAACAAGCCAGCGCTCGGTGAATTCTGCTTCATAAT 350246 Query 136 GATAGGAAGAGCCGACATCGAAGGAT--CAAAAAGCAACGTCGCTATGAACGCTTGGCTG 193 | || ||| |||||| |||||||||| |||||| |||||||| ||||||| ||||||| Sbjct 350247 GGTAAGAAAAGCCGATATCGAAGGATAAAAAAAAGAAACGTCGCCATGAACGATTGGCTG 350306 Query 194 CCACAAGCCAGTTAT 208 ||||||||||||| Sbjct 350307 TGACAAGCCAGTTAT 350321 >seq334 Length=156307 Score = 109 bits (120), Expect = 9e-22 Identities = 81/94 (86%), Gaps = 3/94 (3%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG---TCATCAGTAGGGTAAAACTAACCTGTC 57 |||| ||| | |||||| ||| |||| | ||||||||||||||||||||||||||| Sbjct 91963 TACTGAGCAGGATTACCGTTGCAACGACTGCAGTCATCAGTAGGGTAAAACTAACCTGTC 91904 Query 58 TCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 ||| ||||||||||||||||||||||||||||| Sbjct 91903 TCACAACGGTCTAAACCCAGCTCACGTTCCCTAT 91870 >seq7638 Length=1725835 Score = 104 bits (114), Expect = 4e-20 Identities = 105/134 (78%), Gaps = 6/134 (4%) Strand=Plus/Plus Query 77 GCTCACGTTCCCTATTAG-TGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTAT 135 |||||| || |||| || | ||| ||||| ||| |||| |||||||||||| || Sbjct 933596 GCTCACTTTTCCTAATAAATTGGTCAACAAGCCAGCGCTCGGTGAATTCTGCTTCATAAT 933655 Query 136 GATAGGAAGAGCCGACATCGAAGGATCAAAA-AGCAACGTCGCTATGAACGCTTGGCTGC 194 | || || ||||||||| ||||| |||| |||||||||||||| |||| ||||||| Sbjct 933656 GGTAAGAGGAGCCGACA----AGGATAAAAAAAGCAACGTCGCTATAAACGATTGGCTGT 933711 Query 195 CACAAGCCAGTTAT 208 ||||||||||||| Sbjct 933712 GACAAGCCAGTTAT 933725 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854334561504