Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crassostrea_20virginica_20[genbank_20GCA_5F002022765.1_202017-03-08] 358 sequences; 685,793,667 total letters Query= AAMG01002120.1 Length=347 Score E Sequences producing significant alignments: (Bits) Value seq141 80.6 5e-13 >seq141 Length=9119220 Score = 80.6 bits (88), Expect = 5e-13 Identities = 85/112 (76%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 115 GTTCCACAGGGCCAGGCCCAGGCACCAACGTTGCGCCTTGTCACTGAACCCCGCCAGGCC 174 |||||||||||||||||||| ||| | | || ||||| || |||| ||| || Sbjct 3571447 GTTCCACAGGGCCAGGCCCATGCAGAGTCTCCCCTCCCGGTCACAGATCCCCAGCAGTCC 3571388 Query 175 GTCCTCGCCCCAACGGTAGGCGCGGCTGCGTGCATGGTCATGGGGGAAGTAG 226 ||||| ||||| ||||| || ||| ||| ||||||||||| ||||| ||| Sbjct 3571387 ATCCTCACCCCACCGGTACGCCCGGGAGCGGGCATGGTCATGTGGGAAATAG 3571336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1007996391360