Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq30312 197 3e-48 seq594313 188 1e-45 seq453519 167 4e-39 seq353085 134 3e-29 seq1493952 131 3e-28 seq300440 113 9e-23 >seq30312 Length=2236 Score = 197 bits (218), Expect = 3e-48 Identities = 159/192 (83%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 145 AGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGCTAGACGCGAAACCT 204 ||||| || ||||||||| || || |||||| ||| |||| |||||||||||| | Sbjct 1022 AGCCGGAGCGAAAGCGAGTCTGAATAGGGCGTACAGTCAGTGGGAGTAGACGCGAAACTT 1081 Query 205 TGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGGAGGACCGAACCGGT 264 |||||||||||| | |||| |||||| ||||||| || ||||||| ||||||| || Sbjct 1082 TGTGATCTACCCTTGGTCAGGATGAAGTGGCGGTAAAACGCCATGGAGGTCCGAACCAGT 1141 Query 265 AAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCCAATCAAACTGGGA 324 ||||||||||||||||| |||||| | ||||||||||||||||| |||||||||| || Sbjct 1142 AAACGTTGAAAAGTTTTTGGATGAACTGAGGGTAGGGGTGAAAGGCTAATCAAACTGAGA 1201 Query 325 AATAGCTCGTAC 336 |||||||||||| Sbjct 1202 AATAGCTCGTAC 1213 Score = 114 bits (126), Expect = 2e-23 Identities = 84/98 (86%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCG 70 ||| ||||||||||| |||||| ||| |||| |||||||||||||||| | || Sbjct 828 AGGAGGGTGAAATAGTACCTGAAACCGTGCGCTTACAAGCGGTCGGAGCTTCGCAATGAA 887 Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTA 108 |||||||||||||||||||||||||||||||||||||| Sbjct 888 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTA 925 >seq594313 Length=1469 Score = 188 bits (208), Expect = 1e-45 Identities = 161/192 (84%), Gaps = 5/192 (3%) Strand=Plus/Plus Query 147 CCGAAGTGAAAGCGAGCCTTAACAGGGCGACG-AGTTGGTGGCGCTAGACGCGAAACCTT 205 ||| || ||||||||| || || |||||| ||| || | | ||||||||||||| | Sbjct 574 CCGTAGCGAAAGCGAGTCTGAATAGGGCGCTTTAGTCAGTAGTGTTAGACGCGAAACCGT 633 Query 206 GTGATCTACCCACGAGCAGGTTGAAGTCGC-GGTAACGC-GTGATGGAGGACCGAACCGG 263 |||||||||||| | ||||| ||||| ||| |||||| | ||| |||||| ||||||||| Sbjct 634 GTGATCTACCCATGGGCAGGATGAAG-CGCTGGTAACACAGTG-TGGAGGTCCGAACCGG 691 Query 264 TAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCCAATCAAACTGGG 323 | |||||||||||| |||||||||| | ||||||||||||||||||||||||||| || Sbjct 692 TTGACGTTGAAAAGTCTTCGGATGACCTGTGGGTAGGGGTGAAAGGCCAATCAAACTCGG 751 Query 324 AAATAGCTCGTA 335 |||||||||||| Sbjct 752 AAATAGCTCGTA 763 >seq453519 Length=4065 Score = 167 bits (184), Expect = 4e-39 Identities = 242/336 (72%), Gaps = 7/336 (2%) Strand=Plus/Plus Query 1 TAGCCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCC 60 || |||| | ||||| ||||||||| |||||| ||| || ||||| | || |||||| Sbjct 1136 TACCCCGGG-AGGGGAGTGAAATAGTACCTGAAACCGTTTGCTTACAAACCGTTGGAGCC 1194 Query 61 GAGTGATTCGG-TGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAG 119 | | || |||| |||||||||||| | ||||||||| ||||||||| || | Sbjct 1195 TCCTTGTAGGGGTGACAGCGTGCCTTTTGAAGAATGAGCCTGCGAGTTAGTGATCTGTGG 1254 Query 120 CGAGGTTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGA-CG 178 ||||||||| | | ||| | ||||| || ||||||||| || || ||||||| Sbjct 1255 CGAGGTTAA-CCCGTGAGG---GGCAGCCGTAGCGAAAGCGAGTCTGAATAGGGCGATTC 1310 Query 179 AGTTGGTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGT 238 ||| | || |||||| |||| | |||||||| ||| | |||||||||| |||| Sbjct 1311 AGTCGCAGGTCCTAGACCCGAAGCGAAGTGATCTATCCATGGCCAGGTTGAAGCGACGGT 1370 Query 239 AACGCGTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTA 298 || ||| |||||||||||||| |||||||| |||||| | || || Sbjct 1371 AAGACGTCGTGGAGGACCGAACCCACTTCAGTTGAAAATGGAGGGGATGAGCTGTGGATA 1430 Query 299 GGGGTGAAAGGCCAATCAAACTGGGAAATAGCTCGT 334 |||||||||||||||||||||| | |||||| || Sbjct 1431 GGGGTGAAAGGCCAATCAAACTTCGTGATAGCTGGT 1466 >seq353085 Length=5054 Score = 134 bits (148), Expect = 3e-29 Identities = 113/139 (81%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 191 TAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGG 250 ||||| ||||||| |||||||| ||| | ||||||||||| || ||||| || ||| Sbjct 2044 TAGACCCGAAACCGAGTGATCTAGCCATGGGCAGGTTGAAGGTGCCGTAACAGGTACTGG 2103 Query 251 AGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGC 310 |||||||||||| |||||||||| | ||||||||| | || |||||||||||||| Sbjct 2104 AGGACCGAACCGACTCCCGTTGAAAAGGTAGCGGATGACTTGTGGCTAGGGGTGAAAGGC 2163 Query 311 CAATCAAACTGGGAAATAG 329 |||||||||| ||| |||| Sbjct 2164 CAATCAAACTCGGAGATAG 2182 >seq1493952 Length=185 Score = 131 bits (144), Expect = 3e-28 Identities = 140/185 (76%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 145 AGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGCTAGACGCGAAACCT 204 ||||| || |||| |||| |||||| ||||| | ||||| | ||||| ||||||| Sbjct 1 AGCCGTAGGGAAACCGAGTCTTAACTGGGCGTCTAGTTGCAAGGTGTAGACCCGAAACCG 60 Query 205 TGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGGAGGACCGAACCGGT 264 |||||||| ||| | ||||||||||| ||||| |||||||||||||| Sbjct 61 GGTGATCTAGCCATGGGCAGGTTGAAGGTTGAGTAACATCAACTGGAGGACCGAACCCAC 120 Query 265 AAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCCAATCAAACTGGGA 324 ||||||| |||||| ||||||| | || | |||||||||||||||||||||| ||| Sbjct 121 TAACGTTGCAAAGTTAGGGGATGACCTGTGGCTGGGGGTGAAAGGCCAATCAAACTCGGA 180 Query 325 AATAG 329 |||| Sbjct 181 GATAG 185 >seq300440 Length=9735 Score = 113 bits (124), Expect = 9e-23 Identities = 143/195 (73%), Gaps = 9/195 (5%) Strand=Plus/Minus Query 145 AGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGA-GTTGGTGGCGCTAGACGCGAAACC 203 |||||||| |||| |||| | |||||||||| | || | ||| ||||| ||||||| Sbjct 1906 AGCCGAAGAGAAATCGAGTCCGAACAGGGCGAGAAAGTCGCTGGGTGTAGACCCGAAACC 1847 Query 204 TTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGGAGGACCGAACC-- 261 |||||||| ||| | |||| ||||| || ||||| || |||||| ||||||| Sbjct 1846 AAGTGATCTATCCATGGCCAGGATGAAGGTGCCGTAACAGGTACTGGAGGTCCGAACCCA 1787 Query 262 --GGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCCAATCAAAC 319 ||| |||| ||| |||||| | || |||||||||||||| |||||||| Sbjct 1786 CTGGT----GTTGCAAAACCAGGGGATGAGCTGTGGATAGGGGTGAAAGGCTAATCAAAC 1731 Query 320 TGGGAAATAGCTCGT 334 | |||||||||| || Sbjct 1730 TTGGAAATAGCTGGT 1716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 956656121344