Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13]
1,659,527 sequences; 1,052,631,503 total letters
Query= AAMG01000370.1
Length=180
Score E
Sequences producing significant alignments: (Bits) Value
seq594313 158 1e-36
seq453519 96.9 3e-18
seq300440 84.2 2e-14
seq1062285 82.4 7e-14
>seq594313
Length=1469
Score = 158 bits (174), Expect = 1e-36
Identities = 126/151 (83%), Gaps = 3/151 (2%)
Strand=Plus/Plus
Query 30 GGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGGGATTGGCACATACGAATTGATC 89
||||||||||||||||||||||||||||||||||||||||| ||||| | || | ||||
Sbjct 1 GGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGGGATCTGCACACAAGACTAGATC 60
Query 90 CGTAGATATCCGAATGGGGCAACCCGATATATTGGAGATATATCATAACGCTAGGCGTTA 149
||||||||||||||||||||||||| ||| ||| ||| ||| | | || |||| |
Sbjct 61 CGTAGATATCCGAATGGGGCAACCCACTATGTTGAAGACATAGTACACCGATAGG---TG 117
Query 150 GGCGAACGTGGGGAACTGAAACATCTAAGTA 180
||| ||| | |||||||||||||||||||
Sbjct 118 GGCAAACCCGCTGAACTGAAACATCTAAGTA 148
>seq453519
Length=4065
Score = 96.9 bits (106), Expect = 3e-18
Identities = 94/116 (81%), Gaps = 5/116 (4%)
Strand=Plus/Plus
Query 2 GCAGACGGTGGATGCCTAGGC-TCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAG 60
||| ||||||||||||| ||| ||| |||| ||||||||||||| ||| |||||| |||
Sbjct 584 GCAAACGGTGGATGCCTTGGCATCT-GGAGCCGAAGAAGGACGTAGTAATCTGCGATAAG 642
Query 61 CTACGGGGATTGGCACATACGAA--TTGATCCGTAGATATCCGAATGGGGCAACCC 114
| |||||| | | | | ||||| |||||||| ||| ||||||||||| |||||
Sbjct 643 CCTCGGGGAGTTG-ATAAACGAACTTTGATCCGAGGATTTCCGAATGGGGAAACCC 697
>seq300440
Length=9735
Score = 84.2 bits (92), Expect = 2e-14
Identities = 84/108 (78%), Gaps = 1/108 (1%)
Strand=Plus/Minus
Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67
||||||||||| ||| | |||||| ||| ||||||| |||||||||||| ||||
Sbjct 2623 GGTGGATGCCTTGGCGATTACAGGCGACGAAAGACGTGAAGGCCTGCGAAAAGCTCCGGG 2564
Query 68 GA-TTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC 114
|| |||| | | ||||||||| ||||||| |||||||| |||||
Sbjct 2563 GAGCTGGCGAACGAGCATTGATCCGGAGATATCTGAATGGGGAAACCC 2516
>seq1062285
Length=115
Score = 82.4 bits (90), Expect = 7e-14
Identities = 47/48 (98%), Gaps = 0/48 (0%)
Strand=Plus/Plus
Query 13 ATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAG 60
||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 68 ATGCCTAGGCTCTCGAAGGCGAAGAAGGACGTGATAAGCTGCGAAAAG 115
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 469134644787
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |