Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq594313 158 1e-36 seq453519 96.9 3e-18 seq300440 84.2 2e-14 seq1062285 82.4 7e-14 >seq594313 Length=1469 Score = 158 bits (174), Expect = 1e-36 Identities = 126/151 (83%), Gaps = 3/151 (2%) Strand=Plus/Plus Query 30 GGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGGGATTGGCACATACGAATTGATC 89 ||||||||||||||||||||||||||||||||||||||||| ||||| | || | |||| Sbjct 1 GGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGGGATCTGCACACAAGACTAGATC 60 Query 90 CGTAGATATCCGAATGGGGCAACCCGATATATTGGAGATATATCATAACGCTAGGCGTTA 149 ||||||||||||||||||||||||| ||| ||| ||| ||| | | || |||| | Sbjct 61 CGTAGATATCCGAATGGGGCAACCCACTATGTTGAAGACATAGTACACCGATAGG---TG 117 Query 150 GGCGAACGTGGGGAACTGAAACATCTAAGTA 180 ||| ||| | ||||||||||||||||||| Sbjct 118 GGCAAACCCGCTGAACTGAAACATCTAAGTA 148 >seq453519 Length=4065 Score = 96.9 bits (106), Expect = 3e-18 Identities = 94/116 (81%), Gaps = 5/116 (4%) Strand=Plus/Plus Query 2 GCAGACGGTGGATGCCTAGGC-TCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAG 60 ||| ||||||||||||| ||| ||| |||| ||||||||||||| ||| |||||| ||| Sbjct 584 GCAAACGGTGGATGCCTTGGCATCT-GGAGCCGAAGAAGGACGTAGTAATCTGCGATAAG 642 Query 61 CTACGGGGATTGGCACATACGAA--TTGATCCGTAGATATCCGAATGGGGCAACCC 114 | |||||| | | | | ||||| |||||||| ||| ||||||||||| ||||| Sbjct 643 CCTCGGGGAGTTG-ATAAACGAACTTTGATCCGAGGATTTCCGAATGGGGAAACCC 697 >seq300440 Length=9735 Score = 84.2 bits (92), Expect = 2e-14 Identities = 84/108 (78%), Gaps = 1/108 (1%) Strand=Plus/Minus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 ||||||||||| ||| | |||||| ||| ||||||| |||||||||||| |||| Sbjct 2623 GGTGGATGCCTTGGCGATTACAGGCGACGAAAGACGTGAAGGCCTGCGAAAAGCTCCGGG 2564 Query 68 GA-TTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC 114 || |||| | | ||||||||| ||||||| |||||||| ||||| Sbjct 2563 GAGCTGGCGAACGAGCATTGATCCGGAGATATCTGAATGGGGAAACCC 2516 >seq1062285 Length=115 Score = 82.4 bits (90), Expect = 7e-14 Identities = 47/48 (98%), Gaps = 0/48 (0%) Strand=Plus/Plus Query 13 ATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAG 60 ||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 68 ATGCCTAGGCTCTCGAAGGCGAAGAAGGACGTGATAAGCTGCGAAAAG 115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 469134644787