Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq453519 194 2e-47 seq30312 122 1e-25 seq1506705 96.9 5e-18 seq300440 87.8 2e-15 >seq453519 Length=4065 Score = 194 bits (214), Expect = 2e-47 Identities = 164/198 (83%), Gaps = 8/198 (4%) Strand=Plus/Minus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| ||||||| |||||||||||||||||||||||||||||| ||| | | ||| |||| Sbjct 2602 CTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACATCGTCTTGC-GACTTAGCAC 2544 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCT-- 118 |||||||||||||||||||||||||||||||| || |||||||| |||| | ||| Sbjct 2543 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCACTGGTCTCTGCGGCCACTCCACGCTTC 2484 Query 119 CAAC----ACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTT 174 | || | | |||||| | ||| ||||||||||||||||||||||| |||||| Sbjct 2483 CCACCGCAAGGGTGTTCACGTTTCG-GGCCCCCCTTCTCCCGAAGTTACGGGGGCATTTT 2425 Query 175 GCCGAATTCCTTAACCAC 192 ||||| |||||||||||| Sbjct 2424 GCCGAGTTCCTTAACCAC 2407 >seq30312 Length=2236 Score = 122 bits (134), Expect = 1e-25 Identities = 176/246 (72%), Gaps = 12/246 (5%) Strand=Plus/Minus Query 3 TATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGG 62 || ||||||| ||||||||||| ||||| || ||||| || ||||| | |||||| | Sbjct 2236 TAACCTTCCAGCACCGGGCAGGTGTCAGGCCTTATACTTCATCTTACGAT-TTCGCAAAG 2178 Query 63 ACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAAC 122 | ||||||||| ||||||||||| | | |||||||||||| || | Sbjct 2177 CCATGTGTTTTTGTTAAACAGTCGCCTGGGCCATTTCTCTGCGACCTTT-----CTTTA- 2124 Query 123 ACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATT 182 | | | | | || ||| |||||||||||||||||| || | |||||||| || Sbjct 2123 ---TTGCTAAAAATTAG--GCATCCCTTCTCCCGAAGTTACAGGATTAATTTGCCGAGTT 2069 Query 183 CCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTT 242 ||||| ||| ||||| ||| | ||||||| | || || || |||||||||||||| Sbjct 2068 CCTTAGCCATGATTCACTCGAGCACCTTAGTGTATTCCACTCAACTACCTGTGTCGGTTT 2009 Query 243 ACGGTA 248 ||||| Sbjct 2008 GCGGTA 2003 >seq1506705 Length=192 Score = 96.9 bits (106), Expect = 5e-18 Identities = 148/213 (69%), Gaps = 21/213 (10%) Strand=Plus/Minus Query 3 TATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGG 62 || ||||||| ||||||||||| ||||| || ||||| || |||| || || ||| | Sbjct 192 TAACCTTCCAGCACCGGGCAGGTGTCAGGCCCTATACTTCATCTTA-CGATTTTGCAGAG 134 Query 63 ACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAAC 122 ||||||||||| ||||||||||| | || ||| ||||| || | | | ||| Sbjct 133 CCCTGTGTTTTTGATAAACAGTCGCCTGGACCTCTTCACTGCGGCCCCGATTA-CTC--- 78 Query 123 ACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATT 182 | ||| ||||||||||||||||||||| | |||||||| |||| Sbjct 77 ----------------GGGGCGACCCTTCTCCCGAAGTTACGGGTCTATTTTGCCTAATT 34 Query 183 CCTTAACCACAGTTCACCCGAACGCCTTAGTAT 215 ||||| ||| || | ||| | |||||| || Sbjct 33 CCTTAGCCATGAATCTCTCGAGCACCTTAGGAT 1 >seq300440 Length=9735 Score = 87.8 bits (96), Expect = 2e-15 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200 |||| ||||||||||||||||||| || |||||||| |||||| || ||||| | Sbjct 792 GGCATACCTTCTCCCGAAGTTACGGTATCAATTTGCCGAGTTCCTTCTCCTGAGTTCTCT 851 Query 201 CGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 | | |||||||| || ||| | | ||||||||||||||| ||||| Sbjct 852 CAAGCGCCTTAGAATACTCATCTCGCGCACCTGTGTCGGTTTGCGGTA 899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 683236361871