Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13]
1,659,527 sequences; 1,052,631,503 total letters
Query= AAMG01000538.1
Length=248
Score E
Sequences producing significant alignments: (Bits) Value
seq453519 194 2e-47
seq30312 122 1e-25
seq1506705 96.9 5e-18
seq300440 87.8 2e-15
>seq453519
Length=4065
Score = 194 bits (214), Expect = 2e-47
Identities = 164/198 (83%), Gaps = 8/198 (4%)
Strand=Plus/Minus
Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60
|||| ||||||| |||||||||||||||||||||||||||||| ||| | | ||| ||||
Sbjct 2602 CTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACATCGTCTTGC-GACTTAGCAC 2544
Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCT-- 118
|||||||||||||||||||||||||||||||| || |||||||| |||| | |||
Sbjct 2543 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCACTGGTCTCTGCGGCCACTCCACGCTTC 2484
Query 119 CAAC----ACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTT 174
| || | | |||||| | ||| ||||||||||||||||||||||| ||||||
Sbjct 2483 CCACCGCAAGGGTGTTCACGTTTCG-GGCCCCCCTTCTCCCGAAGTTACGGGGGCATTTT 2425
Query 175 GCCGAATTCCTTAACCAC 192
||||| ||||||||||||
Sbjct 2424 GCCGAGTTCCTTAACCAC 2407
>seq30312
Length=2236
Score = 122 bits (134), Expect = 1e-25
Identities = 176/246 (72%), Gaps = 12/246 (5%)
Strand=Plus/Minus
Query 3 TATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGG 62
|| ||||||| ||||||||||| ||||| || ||||| || ||||| | |||||| |
Sbjct 2236 TAACCTTCCAGCACCGGGCAGGTGTCAGGCCTTATACTTCATCTTACGAT-TTCGCAAAG 2178
Query 63 ACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAAC 122
| ||||||||| ||||||||||| | | |||||||||||| || |
Sbjct 2177 CCATGTGTTTTTGTTAAACAGTCGCCTGGGCCATTTCTCTGCGACCTTT-----CTTTA- 2124
Query 123 ACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATT 182
| | | | | || ||| |||||||||||||||||| || | |||||||| ||
Sbjct 2123 ---TTGCTAAAAATTAG--GCATCCCTTCTCCCGAAGTTACAGGATTAATTTGCCGAGTT 2069
Query 183 CCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTT 242
||||| ||| ||||| ||| | ||||||| | || || || ||||||||||||||
Sbjct 2068 CCTTAGCCATGATTCACTCGAGCACCTTAGTGTATTCCACTCAACTACCTGTGTCGGTTT 2009
Query 243 ACGGTA 248
|||||
Sbjct 2008 GCGGTA 2003
>seq1506705
Length=192
Score = 96.9 bits (106), Expect = 5e-18
Identities = 148/213 (69%), Gaps = 21/213 (10%)
Strand=Plus/Minus
Query 3 TATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGG 62
|| ||||||| ||||||||||| ||||| || ||||| || |||| || || ||| |
Sbjct 192 TAACCTTCCAGCACCGGGCAGGTGTCAGGCCCTATACTTCATCTTA-CGATTTTGCAGAG 134
Query 63 ACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAAC 122
||||||||||| ||||||||||| | || ||| ||||| || | | | |||
Sbjct 133 CCCTGTGTTTTTGATAAACAGTCGCCTGGACCTCTTCACTGCGGCCCCGATTA-CTC--- 78
Query 123 ACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATT 182
| ||| ||||||||||||||||||||| | |||||||| ||||
Sbjct 77 ----------------GGGGCGACCCTTCTCCCGAAGTTACGGGTCTATTTTGCCTAATT 34
Query 183 CCTTAACCACAGTTCACCCGAACGCCTTAGTAT 215
||||| ||| || | ||| | |||||| ||
Sbjct 33 CCTTAGCCATGAATCTCTCGAGCACCTTAGGAT 1
>seq300440
Length=9735
Score = 87.8 bits (96), Expect = 2e-15
Identities = 84/108 (78%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200
|||| ||||||||||||||||||| || |||||||| |||||| || ||||| |
Sbjct 792 GGCATACCTTCTCCCGAAGTTACGGTATCAATTTGCCGAGTTCCTTCTCCTGAGTTCTCT 851
Query 201 CGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248
| | |||||||| || ||| | | ||||||||||||||| |||||
Sbjct 852 CAAGCGCCTTAGAATACTCATCTCGCGCACCTGTGTCGGTTTGCGGTA 899
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 683236361871
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |