Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq30312 152 5e-35 seq1506705 123 3e-26 seq300440 80.6 3e-13 >seq30312 Length=2236 Score = 152 bits (168), Expect = 5e-35 Identities = 142/181 (78%), Gaps = 6/181 (3%) Strand=Plus/Plus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81 ||||||| |||||| ||||| | || ||||| ||||||| ||| |||||||||| || || Sbjct 2006 CGCAAACCGACACAGGTAGTTGAGTGGAATACACTAAGGTGCTCGAGTGAATCATGGCTA 2065 Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTA------CCCAGAA 135 ||||||| |||||| | | ||||||||||||||| || || | |||| || | Sbjct 2066 AGGAACTCGGCAAATTAATCCTGTAACTTCGGGAGAAGGGATGCCTAATTTTTAGCAATA 2125 Query 136 ATGGGAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCA 195 | | ||| ||||||||| || |||||| ||||||||||||||||||| |||| ||| | Sbjct 2126 AAGAAAGGTCGCAGAGAAATGGCCCAGGCGACTGTTTAACAAAAACACATGGCTTTGCGA 2185 Query 196 A 196 | Sbjct 2186 A 2186 >seq1506705 Length=192 Score = 123 bits (136), Expect = 3e-26 Identities = 119/146 (82%), Gaps = 5/146 (3%) Strand=Plus/Plus Query 52 ATACTAAGGCGCTTGAGTGAATCACGGTTAAGGAACTAGGCAAACT-GACCCTGTAACTT 110 || |||||| ||| ||| || ||| || ||||||| |||||||| | ||||| ||||||| Sbjct 1 ATCCTAAGGTGCTCGAGAGATTCATGGCTAAGGAATTAGGCAAAATAGACCC-GTAACTT 59 Query 111 CGGGATAAAGGGTCCCTACCCAGAAATGGGAGGGCGCAGAGAATAGGTCCAGGCAACTGT 170 ||||| || ||||| | || || ||| || || ||||| ||| |||||||||| ||||| Sbjct 60 CGGGAGAA-GGGTCGCC-CCGAGTAATCGG-GGCCGCAGTGAAGAGGTCCAGGCGACTGT 116 Query 171 TTAACAAAAACACAGGGCTGTGCCAA 196 ||| ||||||||||||||| ||| || Sbjct 117 TTATCAAAAACACAGGGCTCTGCAAA 142 >seq300440 Length=9735 Score = 80.6 bits (88), Expect = 3e-13 Identities = 78/98 (80%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAA-TCACGGTT 80 ||||||| |||||| || || | ||| ||| |||||||||||||| ||| ||| || Sbjct 896 CGCAAACCGACACAGGTGCGCGAGATGAGTATTCTAAGGCGCTTGAGAGAACTCA-GGAG 838 Query 81 AAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAA 118 |||||||| |||||| ||| | |||||||||||| || Sbjct 837 AAGGAACTCGGCAAATTGATACCGTAACTTCGGGAGAA 800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 522660074058