Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq300440 96.9 3e-18 seq1506705 93.3 4e-17 seq1305377 87.8 2e-15 seq453519 84.2 2e-14 seq30312 73.4 4e-11 >seq300440 Length=9735 Score = 96.9 bits (106), Expect = 3e-18 Identities = 58/61 (95%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 98 CAAACACGAAAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAATTGAT 157 |||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||| Sbjct 643 CAAACACGAAAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCTGGAAGATTAAATGAT 584 Query 158 G 158 | Sbjct 583 G 583 >seq1506705 Length=192 Score = 93.3 bits (102), Expect = 4e-17 Identities = 71/84 (85%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 |||||||||||| |||||||||| ||||||||| || ||| || |||||||| ||| Sbjct 109 GCGACTGTTTATCAAAAACACAGGGCTCTGCAAAATCGTAAGATGAAGTATAGGGCCTGA 168 Query 128 CGCCTGCCCGGTGCCGGAAGGTTA 151 | |||||||||||| ||||||||| Sbjct 169 CACCTGCCCGGTGCTGGAAGGTTA 192 >seq1305377 Length=135 Score = 87.8 bits (96), Expect = 2e-15 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 24 GACTTGCTCCGTAAGCTCATGCCGGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAA 83 ||||||||| |||||| | | |||| |||||||||| ||||| ||||||||| ||| Sbjct 78 GACTTGCTCTCTAAGCTGACGGGAGTCGCAGATACCAGGTGGCTGCAACTGTTTATCAAA 19 Query 84 AACACAGCACTCTGCAAA 101 |||||||||||||||||| Sbjct 18 AACACAGCACTCTGCAAA 1 >seq453519 Length=4065 Score = 84.2 bits (92), Expect = 2e-14 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 || || ||| ||||| | ||||||||||| ||||||||||| | ||| || || Sbjct 2496 GGCCGCAGAGACCAGTGGGAAGCGACTGTTTACTAAAAACACAGGTCCGTGCTAAGTCGC 2555 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| || ||||| || ||||||||||||||||| |||||||||| Sbjct 2556 AAGACGATGTATACGGACTGACGCCTGCCCGGTGCTGGAAGGTTAA 2601 >seq30312 Length=2236 Score = 73.4 bits (80), Expect = 4e-11 Identities = 79/105 (75%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 ||||| ||| | |||| ||||||||||| ||||||||| || ||| || || Sbjct 2132 GGTCGCAGAGAAATGGCCCAGGCGACTGTTTAACAAAAACACATGGCTTTGCGAAATCGT 2191 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTA 151 ||| || ||||| || |||| |||||||||||| ||||||||| Sbjct 2192 AAGATGAAGTATAAGGCCTGACACCTGCCCGGTGCTGGAAGGTTA 2236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 469134644787