Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= AAMG01001690.1 Length=455 Score E Sequences producing significant alignments: (Bits) Value seq657766 140 9e-31 >seq657766 Length=48544 Score = 140 bits (154), Expect = 9e-31 Identities = 246/354 (69%), Gaps = 21/354 (6%) Strand=Plus/Plus Query 47 GATGGCACGACGCTCCACCTGGGTGGACTTGCACGGAACGCAGATCAGCACACGAGGGCT 106 ||| || || ||||| ||||||||||| ||| || |||||||| | | || ||||| Sbjct 11435 GATCGCGCGGCGCTCGACCTGGGTGGAGCCGCAGGGCACGCAGATGATGATGCGCGGGCT 11494 Query 107 GGGCTGCAGGAAACTGTTTTCG--TGAACCTTGTTGATGAAGTACTGCAGCATCTTCTCG 164 ||| || | | | || || || ||| | |||||||| | || | ||||| |||| Sbjct 11495 GGGG-GC-GAACAGCGTGCGCGGGTGCACCATCTTGATGAACTGCTTGATCATCTGCTCG 11552 Query 165 CAGACGCTGAAGTCGGCGATCACGCCGTCTTTCATCGGACGAATGGCAGCAATATTGCCT 224 || | |||||||||||||||||||||| |||||||| || ||||| | |||||||| Sbjct 11553 GTGATGATGAAGTCGGCGATCACGCCGTCCTTCATCGGCCGGATGGCCTCGATATTGCCG 11612 Query 225 GGTGTACGGCCGAGCATGCGCTTGGCCTCGGTGCCGACGGCAACGA-CACTTTTCTGATT 283 || ||| ||||| |||||||||| ||| ||||| | ||| || || Sbjct 11613 GGCACCTTGCCCAGCATCGCCTTGGCCTCGCGGCCCACGGCCTGTATCAC----CTTCTT 11668 Query 284 ACCATGGG--------TC----CGAATGGCCACAACCGATGGCTCATTCAGGACGATACC 331 ||||||| || || || || || ||||| || |||| || || || || Sbjct 11669 GCCATGGGGGCCGCCCTCGTGGCGGATCGCGACCACCGAAGGTTCATCGAGCACAATGCC 11728 Query 332 GCGCTCGCGCACGTAAATAAGGGTGTTGGCAGTGCCCAGGTCAATGGAAAGATC 385 ||||| || | || ||||| ||||||||||| |||||||| | |||||| Sbjct 11729 TTTGTCGCGGGCGAAGATCAGGGTATTGGCAGTGCCAAGGTCAATCGCAAGATC 11782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1331136642528