Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq453519 268 2e-69 seq30312 123 6e-26 seq594313 114 3e-23 seq353085 104 5e-20 seq714468 100 7e-19 seq505344 91.5 3e-16 seq1299998 89.7 1e-15 >seq453519 Length=4065 Score = 268 bits (296), Expect = 2e-69 Identities = 269/353 (76%), Gaps = 31/353 (9%) Strand=Plus/Minus Query 78 TCGGCGGACGGGATTCCCACCCGTCACACGCTACTCATGCCTGCATTCTCACTCGCATCA 137 |||| ||||||| ||| |||||||| ||||||||||||||||||||||||||| | Sbjct 1978 TCGGAGGACGGGTTTCTCACCCGTCTTTCGCTACTCATGCCTGCATTCTCACTCGTGTGG 1919 Query 138 ACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACACGACGCTCCCCTACCCA---- 193 ||||| | | || | || ||||| | ||||||||||| |||||||| Sbjct 1918 CATCCACGGCTGGTTTACACCGCCGCTTCGCTCGCCACACGACGCTCTCCTACCCATCAC 1859 Query 194 ---------ACCACACAGGT----------------TGCCACAGCTTCGGCGGATAACTT 228 ||||| ||| ||||||| |||||| || ||| Sbjct 1858 CATGACTGGACCACGAAGGCCTATCTATTACGGTAATGCCACAACTTCGGTGGCGTGCTT 1799 Query 229 AAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTC 288 ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1798 GAGCCCCGTTACATTGTCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTC 1739 Query 289 AAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCA 348 |||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1738 AAGGGTGGCTGCTTCTAAGCCAACCTCCTGGTTGTCTGTGCAACTCCACATCCTTTCCCA 1679 Query 349 CTGAGTCAC-CACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 || || ||| | ||| ||| |||||| || || |||||| ||||||||||||| Sbjct 1678 CTTAG-CACGCGCTTGGGGACCTTAGTTGGTGGTCTGGGTTGTTTCCCTCTCG 1627 >seq30312 Length=2236 Score = 123 bits (136), Expect = 6e-26 Identities = 278/411 (68%), Gaps = 20/411 (5%) Strand=Plus/Minus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||| ||||| ||||| ||||||||| ||||||| |||| || || ||| | || Sbjct 1772 CGACTTCGCCTTTCGGCTACGCCTTAGGTCCCGACTGACCCGCGGTTGATTAACATTGCC 1713 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCCT 119 |||| |||| | |||| || | | ||| || | | | | || |||| |||||| Sbjct 1712 GCGGAAACCTTAGTCTTTCGGTGGGCCGATTTCTCATCGGCCTTATCGTTACTTATGCCT 1653 Query 120 GCATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACACGA 179 |||| | | | | ||||||| || ||| | | ||||| || | | | | Sbjct 1652 ACATTTGCTTTTCTAACTGCTCCACCTCA-AGTTATCTCTTGGCTTCGCCGCGGTTAGAA 1594 Query 180 CGCTCCCCTACCCAACCACACAGGTTGCCACA-------GCTTCGGCGGATAACTTAAGC 232 ||||||||||| || | |||| ||| ||||||| | ||| || Sbjct 1593 TGCTCCCCTACC--ACTGTA----TTGCTACAATCCTAAGCTTCGGTACTATATTTATGC 1540 Query 233 CCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGG 292 || || |||||| || || || |||||||||||| ||||||||||||| |||| Sbjct 1539 CCGATTA--TTATCGATGCTCTGTCGCTCGACCAGTGAGCTGTTACGCACTCTTTAAAGG 1482 Query 293 -ATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTT--TCCCAC 349 || ||||||||||||| |||||||||| |||| |||||| || |||| | | || Sbjct 1481 AATAGCTGCTTCCAAGCTAACCTCCTGGCTGTCACGGCAACTGAACCGCCTTAGTTCAAC 1422 Query 350 TGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 | | | | |||||| ||||||||| | |||||| | ||||||||||| Sbjct 1421 TTAATATAGATTTAGGGACCTTAGCTGTAGGTCTGGGTTCTTTCCCTCTCG 1371 >seq594313 Length=1469 Score = 114 bits (126), Expect = 3e-23 Identities = 280/412 (68%), Gaps = 18/412 (4%) Strand=Plus/Minus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||| ||| |||| |||||||||| || |||| ||||| || || | | | | Sbjct 1197 CGACTACCCCTTTCGGGTTCGCCTTAGGTCCAGACTAACCCACAGCTGATTAGCATAGCT 1138 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCCT 119 ||||| |||| | | |||| | |||| ||| | |||| | || |||| |||||| Sbjct 1137 GTGGAAACCTTAGTTTTTCGGTGTGCGGGTTTCTCGCCCGCATTATCGTTACTTATGCCT 1078 Query 120 GCATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACACGA 179 |||| || | | | | |||| ||| | | || | | ||||| | ||| | | Sbjct 1077 ACATTTTCTTTTCTAACCAGTCCAGCACCCCTT-ACGAGATACCTTCAACCCTGTTAGAA 1019 Query 180 CGCTCCCCTACCCA-----ACCAC-ACAGGTTGCCACAGCTTCGGCGGATAA-CTTAAGC 232 ||||||||||| | | ||| | ||| |||||||| ||| |||| || Sbjct 1018 TGCTCCCCTACCACTTTGTATTGCTACAAAAT-CCATAGCTTCGGTA-ATATGCTTATGC 961 Query 233 CCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGG 292 || || ||||| || | || ||| |||||||| ||||||||||||| || | Sbjct 960 CCGATTA--TTATCCATGCTCGTCCGCTCGACTAGTGAGCTGTTACGCACTCTTTAAATG 903 Query 293 A-TGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCA---ACTCCACATCCTTTCCCA 348 | ||||||||||||||||||| |||| | ||||| ||| | || | | ||||| | Sbjct 902 AATGGCTGCTTCCAAGCCAACATCCTAGCTGTCTGGGCAGACAAACCTCGTTCTTTCA-A 844 Query 349 CTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 || || | || ||| |||||||||||| |||||| | ||||||||||| Sbjct 843 CTTAGCATATATTTGGGGACCTTAGCTGATGGTCTGGGTTCTTTCCCTCTCG 792 >seq353085 Length=5054 Score = 104 bits (114), Expect = 5e-20 Identities = 89/110 (81%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 289 AAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCA 348 ||||||||||||||| ||||||||||||| | |||||| || ||||||| ||||||| Sbjct 2485 AAGGATGGCTGCTTCTAAGCCAACCTCCTAGCTGTCTAAGCCTTCCCACATCGTTTCCCA 2426 Query 349 CTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCT 398 || || | |||| ||| ||||||||| | |||||| ||| ||||||| Sbjct 2425 CTTAGCTATAACTTTGGGACCTTAGCTGGCGGTCTGGGTTGTGTCCCTCT 2376 >seq714468 Length=101 Score = 100 bits (110), Expect = 7e-19 Identities = 75/88 (85%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 289 AAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCA 348 ||||||||||||||| ||||||||||||||||||| | | | |||||| |||||||| Sbjct 99 AAGGATGGCTGCTTCTAAGCCAACCTCCTGGTTGTTTTGGAAGTCCCACATGCTTTCCCA 40 Query 349 CTGAGTCACCACTTAGGGGCCTTAGCTG 376 || || ||| | |||||||||||||||| Sbjct 39 CTTAGCCACGAATTAGGGGCCTTAGCTG 12 >seq505344 Length=1219 Score = 91.5 bits (100), Expect = 3e-16 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 289 AAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCA 348 || |||||||||||| |||||||| |||| | ||||| || ||||||| ||||||| Sbjct 271 AATGATGGCTGCTTCTAAGCCAACATCCTAGCTGTCTGAGCCTTCCCACATCGTTTCCCA 212 Query 349 CTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCT 398 || | || |||| ||| ||||||| | | |||||| ||||||||||| Sbjct 211 CTTAACCAGAACTTTGGGACCTTAGCCGGCGGTCTGGGTTGTTTCCCTCT 162 >seq1299998 Length=135 Score = 89.7 bits (98), Expect = 1e-15 Identities = 99/131 (76%), Gaps = 1/131 (1%) Strand=Plus/Minus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||||||| |||||||||||||||| ||| || |||| | |||| | ||| | Sbjct 132 CGACTACGCCTTTCGGCCTCGCCTTAGGGGCCGGCTTACCCTGCTCAGATTAGCTTTAAG 73 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCC-GTCACACGCTACTCATGCCT 119 | |||||||||||| |||||| ||| || ||||| || ||||||||||| | Sbjct 72 CAGGAACCCTTGGACTTTCGGCGACAGGGTCTCTCACCCTGTTTGTCGCTACTCATGTCA 13 Query 120 GCATTCTCACT 130 |||||||||| Sbjct 12 ACATTCTCACT 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158057410048