Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq310145 196 8e-48 seq1521763 185 1e-44 seq1568729 170 3e-40 seq511850 147 4e-33 seq300440 138 2e-30 seq253024 132 8e-29 seq1306873 131 3e-28 seq452841 125 1e-26 >seq310145 Length=2795 Score = 196 bits (216), Expect = 8e-48 Identities = 219/292 (75%), Gaps = 10/292 (3%) Strand=Plus/Plus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||| |||||| ||||||||||||||| || | || | |||||||| | ||||| Sbjct 1474 CCCACACTTTCGTGCCTCAGCGTCAGTTGTTGCTTGGTAAGCTGCCTTCGCTATCGGTGT 1533 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 || | ||||||| ||||||||||||||||| ||||||| | |||| || ||| Sbjct 1534 TCTTGACGATATCTAAGCATTTCACCGCTACACCGTCAATTCCGCCTACCTCATCAACAC 1593 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGC--CCATAGTTTTCACATCTGA 178 ||||| |||| |||| ||| ||||||| || || |||||| |||| Sbjct 1594 TCAAGTCCCGCAGTATCAATGGCACCTCGACAGTTGAGCTGCCGTA--TTTCACCACTGA 1651 Query 179 CTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTA 238 ||| | |||||||| | ||||||| |||||||||||||||| ||||||||||||||| Sbjct 1652 CTTACAGGACCGCCTACGCACCCTTTAAACCCAATAAATCCGGACAACGCTTGCCACCTA 1711 Query 239 CGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 |||||||||||||||||||||||||| ||||||||| |||||| Sbjct 1712 CGTATTACCGCGGCTGCTGGCACGTA------NNNGGCTTATTCGCCAGGTA 1757 >seq1521763 Length=201 Score = 185 bits (204), Expect = 1e-44 Identities = 165/203 (81%), Gaps = 3/203 (1%) Strand=Plus/Plus Query 63 CTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTC 122 |||| ||||||||||||||||||||||||||| |||||||| | || ||| |||||| Sbjct 1 CTCCATATATCTACGCATTTCACCGCTACACATGGAATTCCACTCTCCCCTCTTGCACTC 60 Query 123 AAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGT-TTTCACATCTGACTT 181 ||| |||||||||| || || |||||| || |||| | || ||| || || ||||| Sbjct 61 AAGTTAAACAGTTTCCAAAGCGTACTATGG-TTAAGCC-ACAGCCTTTAACTTCAGACTT 118 Query 182 GCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGT 241 || |||||| | | | |||||| ||||||||||||||| |||||| | |||||||| Sbjct 119 ATCTAACCGCCTGCGCTCGCTTTACGCCCAATAAATCCGGACAACGCTCGGGACCTACGT 178 Query 242 ATTACCGCGGCTGCTGGCACGTA 264 ||||||||||||||||||||||| Sbjct 179 ATTACCGCGGCTGCTGGCACGTA 201 >seq1568729 Length=244 Score = 170 bits (188), Expect = 3e-40 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||||||||||| || ||||||||| ||| |||| ||||||||||||||||| | Sbjct 227 CCCACGCTTTCGCATCTGAGCGTCAGTCTCTGGCCAGGGGGCCGCCTTCGCCACTGGTAT 168 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 |||| | ||||||||||||||||||||||||| | ||||| ||||||||| || Sbjct 167 TCCTTCCGATATCTACGCATTTCACCGCTACACCGGAAATTCTACCCCCCTCTCCAGGAC 108 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 || || ||||||||||||||| |||||||||| | |||||||||||||| Sbjct 107 TCCAGTCTGCCAGTTTCAAATGCAGTTCCCAGGTTGAGCCCGGGGCTTTCACATCTGACT 48 Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACG 227 | | |||||| || || |||||| |||| ||| |||| ||||| Sbjct 47 TAACAAACCGCCTGCATGCGCTTTACGCCCAGTAATTCCGATTAACG 1 >seq511850 Length=1162 Score = 147 bits (162), Expect = 4e-33 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||||||||||| |||||||||||||||| | |||| | | |||||||||| ||||| Sbjct 434 CCCACGCTTTCGCTCCTCAGCGTCAGTTACGGCCCAGAGAACTGCCTTCGCCATCGGTGT 375 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 |||||| |||||| |||||| ||||||||||| ||||||||| | || || | |||| Sbjct 374 TCCTCCTGATATCTGCGCATTCCACCGCTACACCAGGAATTCCGTTCTCCCCTACCGCAC 315 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 || || | || | | ||||||| ||||||||| ||||||||| | ||| Sbjct 314 TCTAGTCTGCCCGTACCCACTGCAGGCCCGAGGTTGAGCCTCGGGTTTTCACAGCAGACG 255 Query 181 TGCCTTCCCGCCTACACGCCCTTTAC 206 || | |||||||| || |||||| Sbjct 254 TGACAAACCGCCTACGAGCTCTTTAC 229 >seq300440 Length=9735 Score = 138 bits (152), Expect = 2e-30 Identities = 142/186 (76%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 44 GCCTTCGCCACTGGTGTTCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCC 103 |||||||||| |||||||||||| ||||||||||||||||| ||||||| ||||||||| Sbjct 4105 GCCTTCGCCATCGGTGTTCCTCCGCATATCTACGCATTTCACTGCTACACGCGGAATTCC 4164 Query 104 GATTGCCTCTCCAGCACTCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCAT 163 ||||| | | |||| || | |||| || |||||| |||||||||| Sbjct 4165 ATCCCCCTCTGCCGTACTCCAGTCATGCAGTCACATATGCAGTTCCCAGGTTGAGCCCGG 4224 Query 164 AGTTTTCACATCTGACTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGAT 223 | ||||||||||| ||||| | |||||| | | | |||||| |||| ||| |||| | Sbjct 4225 GGATTTCACATCTGTCTTGCATGTCCGCCTGCGCACGCTTTACGCCCAGTAATTCCGATT 4284 Query 224 AACGCT 229 |||||| Sbjct 4285 AACGCT 4290 >seq253024 Length=552 Score = 132 bits (146), Expect = 8e-29 Identities = 138/181 (76%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||||||||||| ||| ||||||||| ||||||| ||||||||||||| ||| | Sbjct 380 CCCACGCTTTCGCACCTGAGCGTCAGTCTTTGTCCAGGGGGCCGCCTTCGCCACCGGTAT 321 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 |||||| || |||||||||||||||||||||| ||||||| ||||| || || Sbjct 320 TCCTCCAGATCTCTACGCATTTCACCGCTACACCTGGAATTCTACCCCCCTCTACAAGAC 261 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 || || ||||||| ||||||| |||||||||| | |||||||||| ||| Sbjct 260 TCTAGCTGGACAGTTTTAAATGCAATTCCCAGGTTGAGCCCGGGGCTTTCACATCTAACT 201 Query 181 T 181 | Sbjct 200 T 200 >seq1306873 Length=136 Score = 131 bits (144), Expect = 3e-28 Identities = 102/122 (84%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||||||||||| ||||||||||||| | |||| | ||||||||||||||||||| Sbjct 15 CCCACGCTTTCGCACCTCAGCGTCAGTATCGAGCCAGTGAGCCGCCTTCGCCACTGGTGT 74 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 ||||||| ||||||||| |||||||| |||||| ||||||||| | |||||| | || Sbjct 75 TCCTCCGAATATCTACGAATTTCACCTCTACACTCGGAATTCCACTCACCTCTCTCGAAC 134 Query 121 TC 122 || Sbjct 135 TC 136 >seq452841 Length=1173 Score = 125 bits (138), Expect = 1e-26 Identities = 191/267 (72%), Gaps = 4/267 (1%) Strand=Plus/Plus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTT-ACTGTCCAGCAATCCGCCTTCGCCACTGGTG 59 |||||||||||| | ||||||||| | |||| || || | |||||||| | |||| Sbjct 20 CCCACGCTTTCGTCCATCAGCGTCAATACACTGGT-AGTAACCTGCCTTCGCAATTGGTA 78 Query 60 TTCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCA 119 |||| || |||| ||||||||||||||||| |||| || | || |||| | Sbjct 79 TTCCATGTAATCTCTAAGCATTTCACCGCTACACTACATATTCTAGTTACTTC-CCAGTA 137 Query 120 CT-CAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGA 178 | |||| | |||| |||| || | ||||||| | |||||| |||| Sbjct 138 ATTCAAGTCTAGCAGTATCAATGGCCGTTCCACCGTTGAGCGATGGGCTTTCACCACTGA 197 Query 179 CTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTA 238 ||| | |||||||| ||||||| ||||||| | ||||||||||||| | ||| Sbjct 198 CTTACTAAACCGCCTACGGACCCTTTAAACCCAATGATTCCGGATAACGCTCGGATCCTC 257 Query 239 CGTATTACCGCGGCTGCTGGCACGTAG 265 |||||||||||||||||||||||| || Sbjct 258 CGTATTACCGCGGCTGCTGGCACGGAG 284 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 815475657717