Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq300440 172 4e-41 seq28060 98.7 7e-19 seq353085 91.5 1e-16 seq363886 78.8 6e-13 seq453519 71.6 1e-10 >seq300440 Length=9735 Score = 172 bits (190), Expect = 4e-41 Identities = 121/138 (88%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 3 CCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTGCT 62 ||||||||||||||||||||||||||||||| || | |||||||||||||||| |||||| Sbjct 1 CCTTTTATCCGTTGAGCGATGGCCCTTCCATACAGAACCACCGGATCACTATGTCCTGCT 60 Query 63 TTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTATCA 122 ||||||||||||| | ||| ||||||| |||||||| ||| ||||||||||||||| Sbjct 61 TTCGCATCTGCTCGACATGTCCGTCTCGCAGTCAAGCACGCTTATGCCATTGCACTATCG 120 Query 123 CTACGATTTCCGACCGTA 140 ||||| |||||||||| Sbjct 121 TCACGATGTCCGACCGTA 138 >seq28060 Length=705 Score = 98.7 bits (108), Expect = 7e-19 Identities = 80/97 (82%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 23 GGCCCTTCCATTCATAGCCACCGGATCACTATGACCTGCTTTCGCATCTGCTCTAGTTGT 82 |||||||||||||| | |||||||||||||||||||| |||||| | |||||| | ||| Sbjct 1 GGCCCTTCCATTCAGAACCACCGGATCACTATGACCTACTTTCGTACCTGCTCGACCTGT 60 Query 83 TGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTA 119 ||||||| | |||| ||| ||||||||||||| Sbjct 61 CCGTCTCGCAGTTAAGCTGGCTTATGCCATTGCACTA 97 >seq353085 Length=5054 Score = 91.5 bits (100), Expect = 1e-16 Identities = 73/88 (83%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 23 GGCCCTTCCATTCATAGCCACCGGATCACTATGACCTGCTTTCGCATCTGCTCTAGTTGT 82 |||||||||||||| | |||||||||||||| |||||||||||||| |||||| | ||| Sbjct 4030 GGCCCTTCCATTCAGAACCACCGGATCACTAAGACCTGCTTTCGCACCTGCTCGACCTGT 3971 Query 83 TGCTCTCGCAATCAAGCACACTTTTGCC 110 ||||||| |||||| ||| |||| Sbjct 3970 CCGTCTCGCAGTCAAGCTAGCTTATGCC 3943 >seq363886 Length=2733 Score = 78.8 bits (86), Expect = 6e-13 Identities = 78/101 (77%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 40 CCACCGGATCACTATGACCTGCTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGC 99 ||||||||||||||| || |||||||| ||||||| | || | |||| || |||||| Sbjct 2117 CCACCGGATCACTATATCCCGCTTTCGCGTCTGCTCGACCCGTCGGTCTCACAGTCAAGC 2176 Query 100 ACACTTTTGCCATTGCACTATCACTACGATTTCCGACCGTA 140 | ||| ||| |||||||| | |||| || || |||||| Sbjct 2177 ATGCTTGTGCTATTGCACTCCCCGTACGGTTACCAACCGTA 2217 >seq453519 Length=4065 Score = 71.6 bits (78), Expect = 1e-10 Identities = 90/121 (74%), Gaps = 6/121 (5%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCA---CCGGATCACTATGAC 57 ||||||||||||||||||||| || |||||| || ||||| ||||||||||| | Sbjct 3216 TACCTTTTATCCGTTGAGCGACAGCGCTTCCA--CA-AGCCACTGCCGGATCACTAGTCC 3160 Query 58 CTGCTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCAC 117 | |||||| |||||| | ||| |||| || |||||| | ||| ||| || ||| Sbjct 3159 CGACTTTCGTCCCTGCTCGACCTGTCAGTCTCACAGTCAAGCTCCCTTGTGCACTTACAC 3100 Query 118 T 118 | Sbjct 3099 T 3099 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346523560900