Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq567174 125 1e-26 >seq567174 Length=589 Score = 125 bits (138), Expect = 1e-26 Identities = 140/184 (76%), Gaps = 6/184 (3%) Strand=Plus/Plus Query 147 TGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAG--G 204 |||||||||||||||||||||||| | |||||||| || |||| |||| | Sbjct 256 TGGGCCGCACGCGCGCTACACTGATGCATTCAACGAGTGTTTCC---TGGCTTGAAGAAG 312 Query 205 TCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTT 264 | ||||||||||||| | | ||||| | || || || ||||| |||||||| || | Sbjct 313 T-TGGGTAATCTTGTGAGTATGCATCGTGATTGGAATTGACCATTGTAATTATTGGTCAT 371 Query 265 CAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTT 324 |||||||||| |||||||||| ||||||| | | | |||||| |||||||||||| Sbjct 372 GAACGAGGAATTCCTAGTAAGCATAAGTCATCAACTTGTGCTGATTATGTCCCTGCCCTT 431 Query 325 TGTA 328 |||| Sbjct 432 TGTA 435 Score = 82.4 bits (90), Expect = 1e-13 Identities = 96/126 (76%), Gaps = 3/126 (2%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGG-CTTCTTA 78 || |||||| || ||||||||||||| || ||||| || | || | ||||||| Sbjct 58 GAACGAGACTTTGACCTGCTAAATAGTCACTATAGCTTTAGCTA-TGGCTGCACTTCTTA 116 Query 79 GAGGGACTAT-CGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 137 |||||||| | || | | | | ||||||| | |||||||||||||||||||||||| Sbjct 117 GAGGGACTTTGCGTGTTTAACGCAAGGAAGTTCAAAGCAATAACAGGTCTGTGATGCCCT 176 Query 138 TAGATG 143 |||||| Sbjct 177 TAGATG 182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931480960256