Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq300440 214 3e-53 seq453519 179 7e-43 seq601805 129 1e-27 seq353085 122 2e-25 seq594313 107 3e-21 seq30312 100 5e-19 >seq300440 Length=9735 Score = 214 bits (236), Expect = 3e-53 Identities = 206/263 (78%), Gaps = 1/263 (0%) Strand=Plus/Minus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || ||| |||||||||||||||||||||||||||| ||| ||||| || ||||| | Sbjct 2632 AGAGCATGTGGTGGATGCCTTGGCGATTACAGGCGACGAAAGACGTGAAGGCCTGCGAAA 2573 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 |||| ||||||| || ||| | |||||||| |||| || |||||||||||||| | Sbjct 2572 AGCTCCGGGGAGCTGGCGAACGAGCATTGATCCGGAGATATCTGAATGGGGAAACCCACC 2513 Query 121 CCTTTGG-GTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAA 179 | | | || || ||| |||||||||| || | |||||| |||||||||||| Sbjct 2512 TCGCAAGAGGTATCGCGCGCTCAATACATAGGCGCGCGAGGCGAACCGGGCGAACTGAAA 2453 Query 180 CATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAA 239 ||||| |||||| ||||||||| ||||||||||||||| ||||||||||||||||||| Sbjct 2452 CATCTCAGTAGCCCGAGGAAAAGACATCAACCGAGATTCCGAAAGTAGTGGCGAGCGAAA 2393 Query 240 TGGGATGAGCCTTTACGAGATAG 262 | ||| |||| | ||||||| Sbjct 2392 TCGGAACAGCCATCCAGAGATAG 2370 >seq453519 Length=4065 Score = 179 bits (198), Expect = 7e-43 Identities = 200/265 (75%), Gaps = 14/265 (5%) Strand=Plus/Plus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || ||| | ||||||||||||||| | || ||| ||||||||||||| ||||||| Sbjct 581 AGAGCAAACGGTGGATGCCTTGGCATCTGGAGCCGAAGAAGGACGTAGTAATCTGCGATA 640 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCC--- 117 ||| |||||||| |||| ||||||||||| ||||||||||||||||||||| Sbjct 641 AGCCTCGGGGAGTTGATAAACGAACTTTGATCCGAGGATTTCCGAATGGGGAAACCCCGC 700 Query 118 --GGCCCTTTGGGT----CATTG----CATGCTGAATACATA-GGTATGCAAAGCGAACG 166 |||||||||||| || || | ||||||| ||| || | | || ||||| Sbjct 701 TGGGCCCTTTGGGTGACCCAGTGACTCCCGCCTGAATATATAGGGCGGGTAGAGGGAACG 760 Query 167 CGGCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTA 226 || ||| |||||||||| |||| | |||||| ||||| |||||| |||||| |||| Sbjct 761 TGGGGAAGTGAAACATCTCAGTACCCACAGGAAGAGAAAACAACCGTGATTCCGTTAGTA 820 Query 227 GTGGCGAGCGAAATGGGATGAGCCT 251 ||||||||||||| ||| ||| || Sbjct 821 GTGGCGAGCGAAAGCGGAAGAGGCT 845 >seq601805 Length=1117 Score = 129 bits (142), Expect = 1e-27 Identities = 143/187 (76%), Gaps = 8/187 (4%) Strand=Plus/Minus Query 6 ACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTG 65 ||||||||||||||||||| | | ||||||||||||||||| || | |||||||||||| Sbjct 798 ACATGGTGGATGCCTTGGCAGTCAGAGGCGATGAAGGACGTACTAACCTGCGATAAGCTG 739 Query 66 CGGGGAGTGAGCAA-ACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCC--C 122 | | ||| | || | || || | | | ||||||||||||||||||||||| || | Sbjct 738 TGAGAAGTCGGTAAGAGACGCTATTACTCACAGATTTCCGAATGGGGAAACCCACCCAGC 679 Query 123 TT----TGGGTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAA 178 | ||||| || | ||||||||||||||| | |||||| || |||||||| Sbjct 678 ATAAGCTGGGT-ATCTATTACTGAATACATAGGTAATAGAGGCGAACCGGGAGAACTGAA 620 Query 179 ACATCTA 185 ||||||| Sbjct 619 ACATCTA 613 Score = 100 bits (110), Expect = 5e-19 Identities = 100/126 (79%), Gaps = 4/126 (3%) Strand=Plus/Minus Query 195 AGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAGCCTTTA 254 |||||||||||||||||||||||||| ||||| |||||||||| ||||| |||| ||| Sbjct 448 AGGAAAAGAAATCAACCGAGATTCCCTCAGTAGCGGCGAGCGAACGGGGATTAGCCCTTA 389 Query 255 CGAGATAGTTGAATTGATAGTGGAATCCT-CTGGAAATAGGAGCCATAGCGGGTGATAGC 313 || | ||| | | ||||||||| | ||||||| ||| ||| |||||||||| Sbjct 388 --AGTTTCTTGGA-AGTTAGTGGAATGGTCCTGGAAAGGCCAGCGATACAGGGTGATAGC 332 Query 314 CCCGTA 319 |||||| Sbjct 331 CCCGTA 326 >seq353085 Length=5054 Score = 122 bits (134), Expect = 2e-25 Identities = 155/212 (73%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 6 ACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTG 65 ||| ||||||||||| ||| || ||||||||||||||||| || | ||||| || | Sbjct 1142 ACACGGTGGATGCCTAGGCAGTTGGAGGCGATGAAGGACGTACTAACCTGCGAAAATCCT 1201 Query 66 CGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTT 125 ||| || | || | |||| ||| | | ||||||||||||||||| || | Sbjct 1202 CGGCAAGCTGGTAAGAAGCGCTTGAGCCGGGGGTGTCCGAATGGGGAAACCCACTCCGTA 1261 Query 126 GGGTC-ATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAACATCT 184 || || ||| ||||||||||| ||| | || ||| || |||||||||||||| Sbjct 1262 AGGAGTATCGCAACATGAATACATAGTGTTGCGAGGCAAACCGGGAGAACTGAAACATCT 1321 Query 185 AAGTAGCTGCAGGAAAAGAAATCAACCGAGAT 216 |||| | |||||||||||||||||||||| Sbjct 1322 CAGTACCCCGAGGAAAAGAAATCAACCGAGAT 1353 >seq594313 Length=1469 Score = 107 bits (118), Expect = 3e-21 Identities = 159/223 (71%), Gaps = 18/223 (8%) Strand=Plus/Plus Query 32 GGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGGGAGTGAGCAAACACACTTTGAT 91 ||||| ||||||||| || ||||| ||||| |||||| | ||| ||| | ||| Sbjct 1 GGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGGGA-TCTGCACACAAGACTAGAT 59 Query 92 CCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGGTCATTGCATGCTGAATACA---- 147 ||| |||| ||||||||||| ||||| || || ||| | | | |||| Sbjct 60 CCGTAGATATCCGAATGGGGCAACCCA---CTATG-----TTGAAGACATAGTACACCGA 111 Query 148 TAGGTATGCAAAGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATC 207 ||||| ||||| | || |||||||||||||||||||| | |||| |||||| | Sbjct 112 TAGGTGGGCAAACC-----CGCTGAACTGAAACATCTAAGTAGGCGGAGGAGAAGAAAAC 166 Query 208 AACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAGCC 250 || | |||||| ||||||||||||||||| |||| |||| Sbjct 167 AAAAGTGATTCCGTAAGTAGTGGCGAGCGAACGCGGATTAGCC 209 >seq30312 Length=2236 Score = 100 bits (110), Expect = 5e-19 Identities = 124/167 (74%), Gaps = 11/167 (7%) Strand=Plus/Plus Query 87 TTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGGTCATTGCATGCTGAATAC 146 |||||||||| || ||||||||||| ||||| |||||| ||| | | || || Sbjct 409 TTGATCCGCAAATGTCCGAATGGGGCAACCC----CTTTGG----TTGAAGACCAAAGAC 460 Query 147 AT-AGGTA--TGCAAAGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGA 203 | ||| || | |||||| ||| ||||||||||||||||||| | | ||||| ||| Sbjct 461 TCCAAGTAATTGGAGGGCGAACCCGGGGAACTGAAACATCTAAGTACCCGGAGGAAGAGA 520 Query 204 AATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAGCC 250 || ||| | |||| | |||||||||||||||||| | | ||||| Sbjct 521 AAACAATAGTGATTGCGCAAGTAGTGGCGAGCGAAAGCGCAAGAGCC 567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903158904032