Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_009552.2 Length=40863 Score E Sequences producing significant alignments: (Bits) Value seq655988 174 4e-39 >seq655988 Length=4118 Score = 174 bits (192), Expect = 4e-39 Identities = 387/576 (67%), Gaps = 31/576 (5%) Strand=Plus/Minus Query 37737 TGTTCGGCCGCCAGCTCCGCTTCAACTTACAAGATGGATTTCCGCTCGTGACAACGAAAA 37796 ||||||||| |||| | ||||| | | | | || |||||||| || || ||||| | Sbjct 3119 TGTTCGGCCACCAGATGCGCTTTGATCTGCGCGGGGGCTTTCCGCTGGTCACCACGAAGA 3060 Query 37797 AATTGCATATCCGCTCCATCATTTATGAACTGCTTTGGTTTTTAAAAGGCGATACGAACG 37856 || |||| || |||||||| | |||||||| ||||| | ||| ||| Sbjct 3059 AAGTGCACCTCAAATCCATCATCGAAGAACTGCTGTGGTTCCTCGCCGGCTCGGGCAACA 3000 Query 37857 TCCGCTATTTGCAGGAGAATGGCGTGACGATTTGGGATGAGTGGGCGGACGAAAACGGCG 37916 ||||| ||||| || || || | |||||||| || |||||| || | |||||| Sbjct 2999 ACCGCTGGCTGCAGCAGCGCGGTGTCAGCATTTGGGACGAATGGGCGCGCGCAGACGGCG 2940 Query 37917 ATCTCGGCCCGATTTACGGCGCGCAATGGCGCTCGTGGAAGGGAGCAGA---CGGGAAAA 37973 |||| |||||| | ||||||| |||||||||| ||| || | || |||| | | Sbjct 2939 ATCTGGGCCCGGTGTACGGCGTGCAATGGCGCAGTTGGCCCCGACCCGATGGCGGGCATA 2880 Query 37974 CCATCGACCAGATCGCATGGGTTGTCGAAGAGATCAA-ACGAAATCCGCATTCACGCCGG 38032 |||||||||||| | ||| ||| | |||| || || ||| | || ||||| Sbjct 2879 ---TCGACCAGATCGGTTCGGTCATCGCCACGCTCAAGACCAACCCCG-ACTCGCGCCGC 2824 Query 38033 CTGCTGGTGAGCGCTTGGAATGTAGCAGAATTGGACGAGATGAAGCTGCCGCCGTGTCAT 38092 | | || ||||| ||||| || || ||| | ||| | ||| ||| ||| ||||| Sbjct 2823 ATCATCGTCAGCGCCTGGAACGTGGCCGAACTCGACAAAATGGCCTTGCAGCCCTGTCAC 2764 Query 38093 -TACGCCTTTCAGTTCTATGT--------CGCCAACGGCCGGTTGTCATG-------CAT 38136 ||| | ||||||||||| || ||| ||| | || | | | || Sbjct 2763 ATACTC-TTTCAGTTCTACGTGGCCCCGGCGCAGACGCCGGGCGGGCGCGGCACGCTCAG 2705 Query 38137 GTGGCAG------CAGCGCTCCGTTGATACGTTTTTAGGGTTGCCGTTTAACATCGCGAG 38190 || ||| |||||| || || | || | || |||| || |||||||| || Sbjct 2704 TTGCCAGCTCTACCAGCGCAGCGCCGACATCTTCCTGGGCCTGCCCTTCAACATCGCCAG 2645 Query 38191 CTACGCGCTGTTGACGCATATGGTAGCCCAACAATGCGACTTGGATGTCGGTGAACTCAT 38250 |||||||||| |||| |||||||| ||||| |||||||| ||||| || ||||| |||| Sbjct 2644 CTACGCGCTGCTGACCCATATGGTGGCCCAGCAATGCGAGTTGGACGTGGGTGAGTTCAT 2585 Query 38251 TTTCACCGGCGGCGACGTCCATTTGTACAAAAATCA 38286 | ||||| |||||| |||| | ||| | || || Sbjct 2584 CTGGACCGGTGGCGACTGCCATATCTACGACAACCA 2549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 128065492788550