Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq649786 174 1e-38 seq533080 158 9e-34 seq1631541 107 1e-18 seq644427 105 5e-18 seq418291 82.4 6e-11 >seq649786 Length=1608 Score = 174 bits (192), Expect = 1e-38 Identities = 551/849 (65%), Gaps = 44/849 (5%) Strand=Plus/Minus Query 61099 TACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTT--GTCCAAAGACA 61156 ||||| | || ||||| ||| ||||||| || || | ||||| ||| |||| Sbjct 862 TACAAGCAAGCCGAAGCCAGCTTTTGGACGGCTGAAGAAATTGATTTAAGTC--AAGATT 805 Query 61157 TGAATGACTGGGAGCGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGT 61216 |||| || ||| | | ||| || ||| | |||||| || | || || ||||||| Sbjct 804 TGAACGATTGGCAAGGCTTAAACCACGATGAGCGACATTTTATCACGCACGTTTTGGCGT 745 Query 61217 TCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGG 61276 | |||||||| ||||| || || || || ||| | ||||| ||| | | ||| | Sbjct 744 TTTTTGCCGCCAGCGACGGAATTGTAAACGAAAATCTGGCGGAACATTTTGTGTCGGAAG 685 Query 61277 TGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACT 61336 ||||| |||| || | ||||||||||||||| |||||| | || ||| |||||| Sbjct 684 TGCAATATACGGAAGCTAAATTTTTCTACGGCTTCCAAATTGCCGTTGAAAATATCCACT 625 Query 61337 CGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC-GGAACGTGAACGA 61395 | || | || | ||||| ||||| ||| | | || || || ||| || || Sbjct 624 CCGAAACCTATTCGCTGCTCATTGATACCTACGTGAAAGA-CGCGCAGGAGAAAGACCGT 566 Query 61396 TTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAAT 61455 || | | ||||| || ||||| ||||| |||||| |||||||| || Sbjct 565 CTGCTTCACGCCATTGAAACGATGGAATGCGTGAAAAAGAAAGCCGATTGGGCGTTNNNN 506 Query 61456 TGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAG 61515 ||| || | ||||||| ||||| | || || Sbjct 505 NNNNNNNNNNNNTCAAGAGCGTCT----------GATTGCT----TTTGCCGCCGTGGAA 460 Query 61516 GGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATG 61575 || | || ||| || |||||| | | ||||||||| |||||||||| || || ||| Sbjct 459 GGGATTTTCTTCTCGGGTTCGTTTTGCTCCATCTTTTGGCTGAAGAAACGCGGCCTGATG 400 Query 61576 CCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTT 61635 || || ||| ||| ||||| ||||| || |||||||| ||| ||||||| |||||| Sbjct 399 CCGGGCTTGAGCTTTTCGAATGAATTGATCTCGCGCGACGAAGGCTTGCATTGCGATTTT 340 Query 61636 GC-TGTT-TTGCTATTC-AAACGCTATCTGGTGAATCGTCCGTCGG---AGGAGCGTGTG 61689 || ||| || ||| | |||| | |||| || |||| | | ||||| ||| Sbjct 339 GCCTGTCATTTATATACTAAACAC------GTGATTCAGCCGTTGCCAAAAGAGCGGGTG 286 Query 61690 GGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGA--CGCTTTGC 61747 ||| ||| | || || ||| || ||| |||| ||| |||| || ||||| | Sbjct 285 ATTGAAATTATCAAAGACGCCGTAGTAATTGAAAAGGAGTTTGTGACCGATTCGCTT--C 228 Query 61748 CCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCG 61807 |||| | ||||| |||||| | |||| || ||||| || ||||| || | Sbjct 227 CCGTGAGTTTAATCGGGATGAATGCCGCTTCGATGTGTCAATATATAGAGTTTGTGGCAG 168 Query 61808 ACCGTCTGTTGGTCGATTT----GGGTATGAAGCGGATCTATAATACGAAAAACCCATTT 61863 ||||| || |||| || || || | ||| | |||||| | || || || Sbjct 167 ACCGTTTGCTGGTGGAGTTAACCGGACAAAAAG----TTTATAATGCCGTCAATCCTTTC 112 Query 61864 GATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGC 61923 || || |||||||||||||| || | || || || ||||| || ||||| || || ||| Sbjct 111 GACTTTATGGACATGATTTCCTTGCAGGGAAAAACTAATTTCTTTGAGAAGCGGGTGGGC 52 Query 61924 GACTATCAA 61932 || |||||| Sbjct 51 GAATATCAA 43 >seq533080 Length=1015 Score = 158 bits (174), Expect = 9e-34 Identities = 174/230 (76%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 66241 TTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGG 66300 ||| || || ||||| || |||||||| |||| | || | |||||||| || || Sbjct 547 TTCATAAAGTTGTTCAAATTCATCACCCCAAACTTTGTGAAGGCCTGGACACTCATGAGG 606 Query 66301 ACACATCAGCGACCAATCACCATCCTGTTCT--ACACGACGCATAAATAGATCAGGTATC 66358 ||||||||| | ||| ||||||| || ||| || || ||| |||| ||| || ||| Sbjct 607 ACACATCAGTGTCCAGTCACCAT--TGCTCTCGACTCGCTTCATGAATAAATCTGGAATC 664 Query 66359 CAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAG 66418 || || || ||||| || || |||||||| ||||| || |||| |||||| || | Sbjct 665 CATAGTGCATAGAATAGGTCTCGTGCTCGCTGCTCTTCCTTGCCTGTATTTTTCCGACAA 724 Query 66419 TCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAA 66468 || || || |||||||||||||||||||||||||||||||| ||||| || Sbjct 725 TCCAGAAAGTCAAAGATGTCGGCATGCCATGGTTCCAGGTAAATGGCAAA 774 >seq1631541 Length=403 Score = 107 bits (118), Expect = 1e-18 Identities = 128/174 (74%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 65995 AAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATA 66054 |||||| || | ||||| || || | |||||| || || | ||||| |||| ||||| Sbjct 152 AAACTTAGGCAAGGCAATGGAGGCCAAGTTGCAAACCGCCACTTCGTCGGGAGAAGTATA 211 Query 66055 CTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACT 66114 || | |||||| ||||| ||||| || | ||| |||||||||| || ||||| || Sbjct 212 TTCTATAATTTCCGTGCAAAGATTGCTTGACTTTATCGTGCCCAAATGTTGCTGATTGCT 271 Query 66115 CTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTG 66168 |||||||||| || || ||||| | ||| ||||| || || || || | ||| Sbjct 272 CTTGCGATTGGCGGCGTCTTTGTAAAGCATATACGGCGTTCCTGTTTCTATTTG 325 >seq644427 Length=940 Score = 105 bits (116), Expect = 5e-18 Identities = 126/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399 ||||||||| || || ||||| || || || || ||||||||||| || || || | Sbjct 4 CATAAATAGGTCGGGAATCCAAAGCGCATAAAAAAGATCGCGTGCCCGCATTTCTTCCTT 63 Query 66400 GCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTA 66459 |||||||||||| || || | || ||||| || ||||| ||||| ||||| || || Sbjct 64 GCCGTGATTTTTCTTTAACTCCAAAAAATCAAAAATATCGGCGTGCCAGGGTTCTAGATA 123 Query 66460 GATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGC 66510 ||||| || || | ||||| ||||| |||||||| || ||||| || Sbjct 124 AATGGCAAAACTTCCTTTGCGTTTTCCGCCGCCTTGGTCTACATAGCGTGC 174 >seq418291 Length=2843 Score = 82.4 bits (90), Expect = 6e-11 Identities = 132/183 (72%), Gaps = 10/183 (5%) Strand=Plus/Plus Query 65159 TAGAAATGCATCGATGAT-AATTTTGCATAATTCGGCTCGGCCACATGCATATTCAACGA 65217 ||||||||||| | || | | ||| ||||| || || || || | || || || | || Sbjct 1712 TAGAAATGCAT-GCTGCTCAGTTTGGCATAGTTTGGTTCTGCAATGTGAATGTTGAGGGA 1770 Query 65218 CTGACTCTGATCGATGTAACGACCACGATCTGCAGCCATGTCAATGATACGACGTC-CCG 65276 ||||||||| || ||| | |||||||||| |||||||| | || ||| | | || | Sbjct 1771 CTGACTCTGGTCAATGAACGGACCACGATCAGCAGCCATCTTGATAATA-GTCTTCTGGG 1829 Query 65277 ATATCTCCCAGACGGTCTTGTACAGGCGACGTA---CCTCAATTGGAATCTCCTCAATGT 65333 | |||||||||||||| ||||| || | |||| ||| ||||| ||||||||| Sbjct 1830 AGATCTCCCAGACGGTTTTGTATAGTAGCCGTATACTGTCA---GGAATTACCTCAATGT 1886 Query 65334 CCT 65336 || Sbjct 1887 TCT 1889 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 389526994255280