Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_016654.1 Length=39474 Score E Sequences producing significant alignments: (Bits) Value seq657484 132 1e-26 >seq657484 Length=4216 Score = 132 bits (146), Expect = 1e-26 Identities = 235/335 (70%), Gaps = 6/335 (2%) Strand=Plus/Plus Query 12184 ATCACCATCATCGGCAACCTGGTGGCGGACCCCGAGTTGCGGTTCACGCCGGCCGGTGCT 12243 || ||| || | || ||||| ||| || || || |||| | ||| | | ||| Sbjct 2920 ATTACCGTCGTGGGTAACCTCACGGCTGATCCAGAACTGCGCTACACCCAGAACGGGTTG 2979 Query 12244 GCCGTCGCCAACTTCACCGTCGCGTCCACGCCGCGCACGTTCGACAAGCAGGCGAACGAG 12303 || ||||| |||||||| | || || || || |||| |||||| ||| | | ||| Sbjct 2980 GCGGTCGCAAACTTCACGATTGCCTCTACCCCCCGCAACTTCGACCGTCAGACCAGTGAG 3039 Query 12304 TGGAAGGACGGGGAGGCGCTGTTCATGCGCTGCCAGGTG-TGGCGTGAGGCCGCCGAGAA 12362 ||||||||||| ||| | |||||| | || || || || ||||||||| ||||| | Sbjct 3040 TGGAAGGACGGCGAGCCCCTGTTCCTTCGA-GCGAGTTGCTGGCGTGAGTTTGCCGATCA 3098 Query 12363 CGTCGCCGAGAGC-TTGTCGCGGGGCTCGCGGGTCATCGTCACCGGCAAGCTCAAGTCC- 12420 ||| || ||| | ||| | || || || || ||||| | ||||| ||| ||| Sbjct 3099 CGTTGC-GAGCTCGTTGACCCGCGGGTCACGCGTCATTGCGACCGGACGGCTGC-GTCAG 3156 Query 12421 CGCACCTTCGAGACGCGTGAGGGGGAGAAGCGGACCGTCATCGAACTGGAGGTCGACGAG 12480 || | ||||||| ||||| || ||||| ||| |||||||| ||| ||||||| Sbjct 3157 CGTCAATACGAGACGAAAGAGGGCGAAAAGCGCACCTCGATCGAACTCGAGATCGACGAA 3216 Query 12481 ATCGGCCCCAGCCTCCGCTACGCCACCGCCACCGT 12515 |||||||||||||| || |||||||| || || || Sbjct 3217 ATCGGCCCCAGCCTGCGGTACGCCACGGCAACGGT 3251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123708285942664