Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_031120.1 Length=241147 Score E Sequences producing significant alignments: (Bits) Value seq1638728 147 3e-30 seq529136 143 4e-29 seq655988 118 2e-21 >seq1638728 Length=450 Score = 147 bits (162), Expect = 3e-30 Identities = 194/267 (73%), Gaps = 4/267 (1%) Strand=Plus/Plus Query 196781 TCTTGTCAGCTGTATCAGCGTAGTGCGGATATGTTCCTCGGTGTACCGTTCAACATCGCG 196840 || || ||||| |||||||| || || ||| |||||||||| || |||||||| || || Sbjct 33 TCGTGCCAGCTCTATCAGCGCAGCGCCGATCTGTTCCTCGGGGTGCCGTTCAATATTCCG 92 Query 196841 TCTTACGCATTGCTGATTCACATGGTGGCGCAACAGGTTAACATGGTACCG--GGCGAGT 196898 || ||||| ||||| | |||||| | ||||||||| || | | ||| ||||| Sbjct 93 TCCTACGCGTTGCTCACCCACATGATCGCGCAACAGACCGACCTCG--CCGTTGGCGACC 150 Query 196899 TCGTTTGGACTGGCGGTGACGTCCACATCTACTCCAATCACATGGAACAGGTAGAAGAAC 196958 |||| ||||| ||||||||| ||| | ||| ||||||| | |||||||| || | Sbjct 151 TCGTGTGGACCGGCGGTGACTGCCATGTTTACGACAATCACCTCGAACAGGTTGACCTGC 210 Query 196959 AGCTGTCTCGTAAACCGAAAGCGTTGCCGACGCTGGTTATCAAACGCAAACCGGACAGTA 197018 | || |||| ||||| | |||| | |||| ||| || ||||||| | || Sbjct 211 AATTGAGTCGTGAACCGTTCCCCGTGCCCAGGCTGCACATCGTGCGGAAACCGGCCTCTA 270 Query 197019 TCTTCGATTACAAATTCGAAGACTTCG 197045 ||||||||||| | || |||||||||| Sbjct 271 TCTTCGATTACGAGTTTGAAGACTTCG 297 >seq529136 Length=3526 Score = 143 bits (158), Expect = 4e-29 Identities = 151/199 (76%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 196162 ACAGATGCGCTTCGATCTGCAAGACGGATTCCCGCTGGTCACCACGAAGAAACTCCATCT 196221 |||| |||| ||| || ||||||| || || || || | ||||| || ||||| ||||| Sbjct 163 ACAGTTGCGTTTCAATTTGCAAGAAGGGTTTCCTTTGATGACCACAAAAAAACTGCATCT 222 Query 196222 GCGTTCCATCATTCATGAACTGCTGTGGTTCCTCAACGGGGACACCAACATCAAGTACCT 196281 ||| || ||||| ||||| |||||||||| | || ||||||||||| || || || | Sbjct 223 GCGCTCGATCATACATGAGTTGCTGTGGTTTTTGAAAGGGGACACCAATATTAAATATTT 282 Query 196282 GAATGACAACGGTGTCTCTATCTGGAACGAGTGGGCGAACGAACTCGGTAACCTGGGGCC 196341 || |||||||| || ||||||||| |||| |||||| | ||| || | ||||||| Sbjct 283 AAAAGACAACGGCGTTTCTATCTGGGACGAATGGGCGGATGAAAAGGGAGAGTTGGGGCC 342 Query 196342 GGTTTACGGTAAGCAGTGG 196360 ||| || || | |||||| Sbjct 343 GGTCTATGGGAGTCAGTGG 361 >seq655988 Length=4118 Score = 118 bits (130), Expect = 2e-21 Identities = 179/251 (71%), Gaps = 8/251 (3%) Strand=Plus/Minus Query 196116 ACAAAGCTGACCGTACCGGCACAGGCACTACGT-CCTATCTCGGCGCACAGATGCGCTTC 196174 |||| | ||||| |||||||| ||||| | ||| | ||||| ||||||||||| Sbjct 3155 ACAAGTCGGACCGCACCGGCACCGGCACCAAAAGCCTGT-TCGGCCACCAGATGCGCTTT 3097 Query 196175 GATCTGCAAGACGGATTCCCGCTGGTCACCACGAAGAAACTCCATCTGCGTTCCATCATT 196234 ||||||| | || || ||||||||||||||||||||| | || || |||||||| Sbjct 3096 GATCTGCGCGGGGGCTTTCCGCTGGTCACCACGAAGAAAGTGCACCTCAAATCCATCATC 3037 Query 196235 CATGAACTGCTGTGGTTCCTCAACGG---GGACACCAACATCAAGTACCTGAATGACAAC 196291 | |||||||||||||||||| ||| || || |||| | | ||| | | | Sbjct 3036 GAAGAACTGCTGTGGTTCCTCGCCGGCTCGGGCAACAACCGC---TGGCTGCAGCAGCGC 2980 Query 196292 GGTGTCTCTATCTGGAACGAGTGGGCGAACGAACTCGGTAACCTGGGGCCGGTTTACGGT 196351 |||||| || ||| |||| |||||| || | ||| | ||||| ||||| ||||| Sbjct 2979 GGTGTCAGCATTTGGGACGAATGGGCGCGCGCAGACGGCGATCTGGGCCCGGTGTACGGC 2920 Query 196352 AAGCAGTGGCG 196362 ||| ||||| Sbjct 2919 GTGCAATGGCG 2909 Score = 87.8 bits (96), Expect = 3e-12 Identities = 209/311 (67%), Gaps = 4/311 (1%) Strand=Plus/Minus Query 196783 TTGTCAGCTGTATCAGCGTAGTGCGGATATGTTCCTCGGTGTACCGTTCAACATCGCGTC 196842 ||| ||||| || ||||| || || || || ||||| || | || ||||||||||| Sbjct 2704 TTGCCAGCTCTACCAGCGCAGCGCCGACATCTTCCTGGGCCTGCCCTTCAACATCGCCAG 2645 Query 196843 TTACGCATTGCTGATTCACATGGTGGCGCAACAGGTTAACATGGTACCGGGCGAGTTCGT 196902 ||||| |||||| || |||||||| || || | ||| ||| |||||| | Sbjct 2644 CTACGCGCTGCTGACCCATATGGTGGCCCAGCAATGCGAGTTGGACGTGGGTGAGTTCAT 2585 Query 196903 TTGGACTGGCGGTGACGTCCACATCTACTCCAATCACATGGAACAGGTAGAAGA-ACAGC 196961 ||||| || || ||| ||| |||||| ||| ||| | ||||| | ||| || | Sbjct 2584 CTGGACCGGTGGCGACTGCCATATCTACGACAACCACCACGCGCAGGT-GCAGACCCAAC 2526 Query 196962 TGTCTCGTAAACCGAAAGCGTTGCCGACGCTGGTTATCAAACGCAAACCGGACAGTATCT 197021 || | || | || | | | ||| | || |||| ||| || ||||| |||| Sbjct 2525 TGGCGCGCAGCCCCTATCCCTACCCGCAGTTGCGCATCAGGCGCCGGCCCGACAGCATCT 2466 Query 197022 TCGATTACAAATTCGAAGACTTCGAACTGGTAGGCTA-CGATCCGCATCCGGCGATTAAA 197080 |||| ||| | |||||| ||||| || | | ||| |||| | || || ||||| || Sbjct 2465 TCGACTACCGCTACGAAGATTTCGAGGTGCTGGACTACCGATGC-CACCCCGCGATCAAG 2407 Query 197081 GCCCCGGTGGC 197091 || || ||||| Sbjct 2406 GCGCCAGTGGC 2396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755537456944440