Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eisenia_20fetida_20[genbank_20GCA_5F900000155.1_202017-02-13] 1,659,527 sequences; 1,052,631,503 total letters Query= NC_031918.1 Length=45342 Score E Sequences producing significant alignments: (Bits) Value seq654591 86.0 2e-12 >seq654591 Length=8035 Score = 86.0 bits (94), Expect = 2e-12 Identities = 197/293 (67%), Gaps = 8/293 (3%) Strand=Plus/Plus Query 33624 TTCTGTGGTGTATTTTTCAACTCCAGCATTATCAGTCCATTTTCTAGTGCGCAA-CTGAC 33682 ||| ||| || | ||||| || || | || |||||||| | |||||||| ||| | Sbjct 5978 TTCGGTGCTGAACTTTTCCACGCCGCTCTGGTCGGTCCATTTGCGGGTGCGCAAACTG-C 6036 Query 33683 CTTCAAAATAAACTTGTGAGCCTTTCCTAAGATACTCACCAGCAATTTCAGCGAGC---T 33739 |||| | ||| || || |||||||| | || |||| | || ||||| || || | Sbjct 6037 CTTCCACATACACCTGCGAGCCTTTGCGCAGGTACTGGCTGGCGATTTCCGCCAGACGGT 6096 Query 33740 TGCCAAAGATAACTACGCGGTGCCATTCAGTTTGCTCCTTTTTCTCACCAGTAGCCTTAT 33799 || ||||| | ||||||||||| || || ||||| | ||||| || ||| | Sbjct 6097 CGCGAAAGA---CCACGCGGTGCCACTCGGTGGCTTCCTTCATTTCACCGGTCTGCTTGT 6153 Query 33800 CATTCCATGATTCCGATGTAGCAACAGATACGTTGGCAACAGCGCCGCCATTTGGCATGT 33859 | ||||| || | || || || | || ||||| | ||||||| | || | | Sbjct 6154 CTTTCCACTTGTCGGTGGTGGCGACGGTGACATTGGCGATTTGGCCGCCACTGGGGAAGG 6213 Query 33860 ATCGCACTTCTGGGTCCTGGCCTAATGTGCCGAGGATGATTACTTTATTTACG 33912 |||| ||| ||||| |||| | |||||| |||||| ||||| || ||| Sbjct 6214 TACGCATTTCAGGGTCGCGGCCCAGGTTGCCGACGATGATGACTTTGTTCACG 6266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 142115837974096