Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enteromyxum_20leei_20[genbank_20GCA_5F001455295.1_202015-12-02] 69,045 sequences; 67,975,573 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq68985 145 1e-32 seq33735 145 1e-32 seq48657 91.5 2e-16 >seq68985 Length=1512 Score = 145 bits (160), Expect = 1e-32 Identities = 174/229 (76%), Gaps = 12/229 (5%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||| |||||| ||||| | || ||||||||| |||||||| ||||| ||| Sbjct 897 GTACAAAGGGCAGAGACGTATTCAACACAAG-TTGATGACTTGCGCTTACGAGGAA-TTC 840 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGA-TGAAATTTCAAAGATT 119 | | || | || ||| |||| ||| | || ||||| ||||||| | |||| || |||| Sbjct 839 CACTTTCATGAGCAATAATTACAAGGCTCAATCCCGATCACGACAGCAATT--AATGATT 782 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 | | || ||| ||| | | ||| ||| || |||||||||||||| Sbjct 781 AGTCTACTCTTTCGAGCAA----ACA-ACTATTTGCTGCTGCCATTGTAGCGCGCGTGCA 727 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 |||||||||||| ||||||||||||||||||||||||| || |||||| Sbjct 726 GCCCAGAACATCGAAGGGCATCACAGACCTGTTATTGC--CACACTTCC 680 >seq33735 Length=1576 Score = 145 bits (160), Expect = 1e-32 Identities = 174/229 (76%), Gaps = 12/229 (5%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||| |||||| ||||| | || ||||||||| |||||||| ||||| ||| Sbjct 680 GTACAAAGGGCAGAGACGTATTCAACACAAG-TTGATGACTTGCGCTTACGAGGAA-TTC 737 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGA-TGAAATTTCAAAGATT 119 | | || | || ||| |||| ||| | || ||||| ||||||| | |||| || |||| Sbjct 738 CACTTTCATGAGCAATAATTACAAGGCTCAATCCCGATCACGACAGCAATT--AATGATT 795 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 | | || ||| ||| | | ||| ||| || |||||||||||||| Sbjct 796 AGTCTACTCTTTCGAGCAA----ACA-ACTATTTGCTGCTGCCATTGTAGCGCGCGTGCA 850 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 |||||||||||| ||||||||||||||||||||||||| || |||||| Sbjct 851 GCCCAGAACATCGAAGGGCATCACAGACCTGTTATTGC--CACACTTCC 897 >seq48657 Length=15905 Score = 91.5 bits (100), Expect = 2e-16 Identities = 164/230 (71%), Gaps = 15/230 (7%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||| || ||| |||| | |||| | |||||||||||||| ||| ||||||| | Sbjct 13870 GTACAGAGAGCAAAGACGCATTCAATA--AATTTGATGACTCGCGCCTACGAGGAATT-C 13926 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGAT-GAAATTTCAAAGATT 119 | | || | || || |||| ||| | || ||||| ||||| | |||||| || |||| Sbjct 13927 CACTTTCATGAGTAATAATTACAAGGCTCAATCCCAATCACAACAGAAATT--AATGATT 13984 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGT-GTAGCGCGCGTGC 178 | | | | || | || | | ||| ||| | | || | ||||| || |||| Sbjct 13985 A----GTCTTCTCCTTCGAGTAAACA-ACTATTTGC-TGCTGCAATTGTAGCACGAGTGC 14038 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 |||||||||||| ||||| ||||||||||||||||||| || |||||| Sbjct 14039 AGCCCAGAACATCAAAGGGAATCACAGACCTGTTATTGC--CACACTTCC 14086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751497007175